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13_1_20cm_4_scaffold_23807_2

Organism: 13_1_20CM_4_Bacteriodetes_60_6

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1
Location: comp(252..764)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 154.0
  • Bit_score: 171
  • Evalue 7.60e-40
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 154.0
  • Bit_score: 171
  • Evalue 1.50e-40
RNA polymerase, sigma-24 subunit, ECF subfamily id=4419192 bin=GWF2_Lentisphaerae_50_93 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 171.0
  • Bit_score: 155
  • Evalue 4.00e-35

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 513
ATGTCGCCCGAGGCCCTGCAGCTCGAACGAGAGCTCGATCAGCTGCACCCCGCGGCCTTCGGTTGGGCCCTCGCCTGCTGCGCGGGCGACCGCGCCGCCGCCGAGGACGCGCTCCAGGCGAGCTACCTGAAGATCCTGGAAGGGCGGGCTCGGTTCGACGGACGAGCGAGTTTTCGGACTTGGCTTTTCTCGGTGGTGCGCTACACCGCGGCAGGGCAGCGCCGCCGCGCGGTGCTGCGGAGATGGCTGCCGCTCGCTGCTCTCGGCGCAACGTCCGACGGGCGGCCCGACGCCGTGACCGAGCTGGTGCGCGCGGACGGGACCCGTCGGCTCACAGCAGCTCTCGCCACGCTGCCGCGCCGCCAGCGCGAGGTGCTGCACCTGGTGTTCTACCAGGACCTGACGATCGCCGAGGCGGCGGAGGTCGTGCGAATCTCACTCGGCACCGCCCGCACCCACTACGAGCGCGGCAAGGCCGCGCTCAGGAAGCTGCTGAAAGAGGAACTGGAATGA
PROTEIN sequence
Length: 171
MSPEALQLERELDQLHPAAFGWALACCAGDRAAAEDALQASYLKILEGRARFDGRASFRTWLFSVVRYTAAGQRRRAVLRRWLPLAALGATSDGRPDAVTELVRADGTRRLTAALATLPRRQREVLHLVFYQDLTIAEAAEVVRISLGTARTHYERGKAALRKLLKEELE*