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13_1_20cm_4_scaffold_29055_3

Organism: 13_1_20CM_4_Bacteriodetes_60_6

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1
Location: comp(3401..3808)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein {ECO:0000313|EMBL:KIC94207.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter so UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 112.0
  • Bit_score: 91
  • Evalue 1.00e-15
Similar to ASPIC and UnbV protein containing FG-GAP repeats id=4171435 bin=GWC2_Bacteroidetes_40_22 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 44.5
  • Coverage: 110.0
  • Bit_score: 89
  • Evalue 3.70e-15
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 114.0
  • Bit_score: 72
  • Evalue 1.30e-10

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 408
ATGACCGGAGCCGCGAGTGGGTTGTACGTGGACGGTGATGCGAAGGCGATCGCCGAGCTCGTGTTAGACGACACGCACTCGCTGGTGCTCGTCACGCAGAACGACGACAGTCTGAAGGTATTCACGCAATCGCGCCACGGCCGCACGCGCAACCTTCGGGTCGGCGCGCTCGACGCCTACGCCGTGCTCACGCTGGCGAACGGCACGACCCGAAGAGAGGAGCTCTATTACGGCTCCGGGTACTTATCCCAGTCGTCCCGCTTTCTGCGGGTGCCGGAAGGGGTGACGAGAGTGACCGTGTACGATTCCCGGGGGCATAGCCGGGACGTGGTTCTGAGGCCGGGGTCGCGAGTCTACTCGCGGCTTTTCGGAGTCGCGGCTGAAGCCGCGGCTCGGCCCTGCCGCTGA
PROTEIN sequence
Length: 136
MTGAASGLYVDGDAKAIAELVLDDTHSLVLVTQNDDSLKVFTQSRHGRTRNLRVGALDAYAVLTLANGTTRREELYYGSGYLSQSSRFLRVPEGVTRVTVYDSRGHSRDVVLRPGSRVYSRLFGVAAEAAARPCR*