ggKbase home page

13_1_20cm_4_scaffold_4170_1

Organism: 13_1_20CM_4_Bacteriodetes_60_6

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1
Location: 3..2891

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI8_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 734.0
  • Bit_score: 645
  • Evalue 9.50e-182
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG93779.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 981.0
  • Bit_score: 840
  • Evalue 2.80e-240
TonB-dependent outer membrane protein, SusC/RagA similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 981.0
  • Bit_score: 840
  • Evalue 5.70e-241

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2889
GTCTCCGTGACGCCGGCCGGCACGGCCGAAGTGCCATTCGGGCTCGCGCCGCAAGCCTCGCTGCTCGAGCCGGTCGTCGTGACCGGCTATGGGTCACAGCGGCGCGAAGCGATCACCGGGTCGGTCTCATCGGTCAACGCGTCGCAGGCGAACGTCGGTGTGGTGACCAACCCGACCCAGATGATCATCGGGCGAGCTGCGGGCGTCGAGATCACGCAGAACAACGGCGAGCCTGGCGCCGGCGCGCAAATCCTGATTCGCGGCGGGAGCTCCATCAGCAACAGCAACGATCCGCTCTACGTGATCGACGGCGTGCCGATCAACAACGTGGCGACCGAGCCGCCGAGCATCTCCGGCGTCGTCGGCTCACCACCGCTCCCCCGCAATCCGCTGAATACCCTGAACCCCTCTGACATCGCTTCGATCACCATCCTGAAGGACGCATCGGCAACCGCGATTTACGGGAGCCGCGCCGCGAACGGGGTGATCCTGATCGAGACGAAAAAGGGGACCGCAGCCGGTGGGCCTACGATCGAGTACGACAGCTACGTCGCCGCCGCTTCGCCGGCAAAGCGGCTCGACGTGCTCAACGGCACGGAGTACAAAACCTACGTGCAGGGCCAGTTTTCCGCCTGGCGAACGGATTCGACCGCCTGCGTTGCCCGACCGGCATGCTCCACTGGCTTCAGCGATTCGTCCGGTACCTTTGCTGGGATCAAGCCGTTTGCACTTGGCCCCGCCAATACAAACTGGGAAGACGCGGTCACTCGTACCTCGGTCACCCACAACCACAACCTCTCCTTCACGGGTGGAAACGAGGATACCCGCTATCGCGCTTCACTCAATTACATGAAGCAGCAGGGAGTGGCGATTACCAACGGACTCGAGCGGATTCAAGGACGGCTCGCCGCAACGCATCACGCGTTGGACAACCGCCTGCGGCTGGGTGTGAACGTCACCACGTCGCGCGTCAACAACCGCTATCTGACCTATGACAATTCCGGCGGGTTTGAGGGTGGTGTGTTCCAGAACGTCGCCATCTTCGATCCCACGCAGCCGATCACCGTCAAGGACGCCACCGGCGTTCACTACTACGAGGGAGGGGGTAGCTCGGTTCGCAACCCCGTAGCCCTCGCGAACCAGTTGCTCGACCAGGGTCAAACCACCCGTACCATCGGCACCGCGACGGCCGAGCTGGACCTCGCGCCGGGCCTCACCGGTCAGGTCCTTGTCGGTTTGGATCACGCGGGCGGGGGACGCCAGATCTACTACCCCAAGGCCAACCCCATCGGCAATGCGCTGGGAGGCGGCGTGGCGCGCCAGTACGATCTGGAGAACAACGCGCGCACCGTGCAGACCTTGTTGACATACCGCCGCGAGACCGGGGACAACAGCTTCGACATCGTGGGTGGATACGAGTACAACAAGTTCGCCAGCAACTTGTTCATGGCAGAGGGCAAGGGGTTCTCCACCGACGCGTTCTCCTTCAACAACATCGGGGCCGCCACCTCGCGCACCGATTCGTCCGACGCGCAGCAGAGCCTGCTCGTGTCCTTCCTCTCACGCGCGAACTTCGGCTACAAGAACCGGTACTTCGTAACGGGCACGTTCCGTCGCGACGGATCGTCGAAGTTCGCCCCCGGCCATAAGTGGTCGACGTTCCCGGGCATCTCGGCCTCGTGGCACCTCTCCGACGAAGATTTCATGCGCAGCTCGCCAGTCTCCGATCTGCGCCTGCGCGTGGGTTGGGGCTTGCAAGGCAACCCGGGCATCCCGGCGTATTCATCGCAGCAGCTCCTCGGCATCGGGTCGGGAAGCACGTATCCCTGGGGCGACGTGGTGCAGACCGGCGCCGCCATCACGCAAAACCCCAACCCGAACCTCAAATGGGAGCGGACGGCACAGGTCGACGTCGGCGTGGACTTCGGCCTCATGAGCAACCGGCTCACGGGAACCGCCGAATACTACGTCAAGAACACGTCCGACCTTTTGTTGTCCGTCAAGGTGGCGCAGCCGGCGGGAGTGGAAGAACGGCTCGAGAACGTTGGGAAGCTGCGGAATCGCGGCGTCGAGCTGGCCCTCGAAGCGCTGGCGGTCTCCAGCCCCAGCATGACCTGGCGCGCCGGACTGACGTTTACGGCTGACCGCAACAAGATCGTCAACCTGGCGTCGCGCGGGGGGACGCTTTCGTCCGGTGGCGTCAGCGGTCAGGGCCAGTCGGGCCAAGTCTCGGAACTCATCGGCCCCGGACTCCCGCTCGGCACCTTCTATGGGCCCGTGTTCGTGGGCGTCAACGCGGCGGGCAAACAATTGTTTCGCTGCACGTCGCTCGGAGCAGGCGATACGACCGCAACCGGGCAACAAAAATGCCAGAGCGGTGTGATGACCGAGGCGCGGGCCAGCGATTACGCGGTCATCGGCAACGCCAACCCGAGCTTCACCCTCGGCTTCCATAATCAGGTCACGTGGCGGAAGTTCGACCTGAGTTTCTTGATTCGCGCGGTGGTGGGACAGGATGTCTTCAACAACACGGCGCTCGTGTATTCCACGAAGGGCAATGCGCTGCAAGGGAAGAACTTCCTCAAGCCGGCGCTCACCGACCCGACGGGTCTCCATGAGCCGGCCATCTTCTCATCGCGCTGGATCGAGAGCGGCTCGTTCGTGCGGCTGCAAAACATCACGCTCGAGTATGCGCTCGATCTGCCGATGATCCGTTCGGTCCAAAGCGCGCGGTTGTACGTCTCGGCGGACAACCTGTTGCTGTTGACCGGCTACTCAGGCCTCGATCCGGAGGTCTATGCCAGCTCCGGCCTGGCCTCGCGCGGGATCGATTATCTCAGTTATCCCCGGCCCCGCACGGTGACCGGTGGTCTTCGTCTCACGTTCTGA
PROTEIN sequence
Length: 963
VSVTPAGTAEVPFGLAPQASLLEPVVVTGYGSQRREAITGSVSSVNASQANVGVVTNPTQMIIGRAAGVEITQNNGEPGAGAQILIRGGSSISNSNDPLYVIDGVPINNVATEPPSISGVVGSPPLPRNPLNTLNPSDIASITILKDASATAIYGSRAANGVILIETKKGTAAGGPTIEYDSYVAAASPAKRLDVLNGTEYKTYVQGQFSAWRTDSTACVARPACSTGFSDSSGTFAGIKPFALGPANTNWEDAVTRTSVTHNHNLSFTGGNEDTRYRASLNYMKQQGVAITNGLERIQGRLAATHHALDNRLRLGVNVTTSRVNNRYLTYDNSGGFEGGVFQNVAIFDPTQPITVKDATGVHYYEGGGSSVRNPVALANQLLDQGQTTRTIGTATAELDLAPGLTGQVLVGLDHAGGGRQIYYPKANPIGNALGGGVARQYDLENNARTVQTLLTYRRETGDNSFDIVGGYEYNKFASNLFMAEGKGFSTDAFSFNNIGAATSRTDSSDAQQSLLVSFLSRANFGYKNRYFVTGTFRRDGSSKFAPGHKWSTFPGISASWHLSDEDFMRSSPVSDLRLRVGWGLQGNPGIPAYSSQQLLGIGSGSTYPWGDVVQTGAAITQNPNPNLKWERTAQVDVGVDFGLMSNRLTGTAEYYVKNTSDLLLSVKVAQPAGVEERLENVGKLRNRGVELALEALAVSSPSMTWRAGLTFTADRNKIVNLASRGGTLSSGGVSGQGQSGQVSELIGPGLPLGTFYGPVFVGVNAAGKQLFRCTSLGAGDTTATGQQKCQSGVMTEARASDYAVIGNANPSFTLGFHNQVTWRKFDLSFLIRAVVGQDVFNNTALVYSTKGNALQGKNFLKPALTDPTGLHEPAIFSSRWIESGSFVRLQNITLEYALDLPMIRSVQSARLYVSADNLLLLTGYSGLDPEVYASSGLASRGIDYLSYPRPRTVTGGLRLTF*