ggKbase home page

13_1_20cm_4_scaffold_239102_2

Organism: 13_1_20CM_4_Cyanobacteria_61_6

partial RP 5 / 55 MC: 1 BSCG 5 / 51 MC: 1 ASCG 2 / 38 MC: 1
Location: 581..1078

Top 3 Functional Annotations

Value Algorithm Source
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49261.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 146.0
  • Bit_score: 126
  • Evalue 2.70e-26
outer membrane autotransporter barrel protein id=2979139 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 37.1
  • Coverage: 143.0
  • Bit_score: 81
  • Evalue 1.20e-12
outer membrane autotransporter barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 150.0
  • Bit_score: 71
  • Evalue 2.10e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 498
ATGCGTCTCTCCTCATCAATATCACTCGCGGTGCCTCCTCCGCGTCCGCGCCTACGATTGCCGTTATTATTTGTGACGGTAGCGACGTTGCTGCTTCTGCTTTCAACGGCAGGCAGCACCTTTGCCAACAGCGCTACGTGGAAGCCCAATCCCGCTACGAGCGATTGGAACCACGCCGCAAACTGGATGCCGCACACTGTCCCTAACGGCGCAACAGACACGGCGTCGTTTGCCACCTCCAATACAACCAATGTCTTCCTCTCCGCTAACACGGAAGTGAACGGCATCGTCTTTAACGCCGGCGCGAGTGCGTTCACCATCACCGTCGGTCCCACATTGACGTTGACCGTCAGCGGCGCGGGGATCACGAATAATTCAGGGGTCACGCAGAATTTTGTGACTATGGCCGATATCAACGGCACACAACATGGAACGATACAATTCACAAACGGCGCGACTGCGGGGAATGGGACTCGCATCACTGACAGCGGCCCCGAG
PROTEIN sequence
Length: 166
MRLSSSISLAVPPPRPRLRLPLLFVTVATLLLLLSTAGSTFANSATWKPNPATSDWNHAANWMPHTVPNGATDTASFATSNTTNVFLSANTEVNGIVFNAGASAFTITVGPTLTLTVSGAGITNNSGVTQNFVTMADINGTQHGTIQFTNGATAGNGTRITDSGPE