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13_1_20cm_4_scaffold_41595_2

Organism: 13_1_20CM_4_Cyanobacteria_61_6

partial RP 5 / 55 MC: 1 BSCG 5 / 51 MC: 1 ASCG 2 / 38 MC: 1
Location: 372..1631

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J640_NOSP7 similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 420.0
  • Bit_score: 605
  • Evalue 4.70e-170
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 409.0
  • Bit_score: 605
  • Evalue 5.10e-170
RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 420.0
  • Bit_score: 605
  • Evalue 1.30e-170

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Taxonomy

R_Acidobacteria_61_28 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
GTGGAGCAGGCTCTCGGTGCCAACGCGGCAGTCGATCTCGTCTATCGTTCCGACTGGGGCCGGATCGTCGCCACGCTGATCCGGCTCGTCGGTGACTTCGACGTGGCCGAAGAGGCCGCCCAGGAAGCGTTCGCGACCGCGGTGGATCAGTGGCCGGTCTCCGGCGTCCCCGACGTCCCGCGCGCCTGGATCATCCAGACGGCACGGCACAAGGCGATCGATCGCATCCGGCGCCGGGTGCGGTTCGACGAAAAGCTGGACGCGTACGCCTCCGAGCTGACCCCGATCGTGGAGGAGCCCGACTACGACCCCGATCAAATCCCCGACGACCGCCTGCGGTTGATCTTCACCTGCTGCCACCCGTCGCTGTCGCTCGAGGCGCAAGTGGCGCTCACGCTCCGGACACTCGGCGGCCTCGAGACGGACGAGATCGCCCGGGCGTTCCTCGTCCCGGTCGCCACGATGGCTCAGCGGCTCGTGCGCGCGAAGGGCAAGATCCGCGACGCGGGCATCCCGTATTCCGTGCCGGACACGAAGGACATGCCCGGTCGGCTCGACGCCGTGCTGACCGTGATCTATCTCGTCTTCACCGAGGGCTACGCGGCCACGCGCGGCGACGCGCTGGTGAGGACCGACTTCTGCGCCGAGGCGATCCGGCTGGCCCGCCTGGTGAGGACGTTGATGAGCCCGGGGCCGCCGTCGGAGGCGACGGCGCTCCTGGCCCTCATGCTGCTGCACGATTCGCGGCGCGAAGCCCGTCTCGACGACGCCGGTGACCTCGTCCTGCTCGAAGATCAGGACCGCGACCGCTGGAACCACCCCCAGATCGGCGAAGCGCTGCCACTCGTCGAGGAAGCGCTGCGCGGCGGACCTGGCCCGTTCGCGGTGCAGGCGGCGATCGCGGCGCTGCATTGCCAGGCGACGCGGGCCGAAGACACCGATTGGGCGCAGATCGTGGGGCTCTACGACCTGCTCGAGCGCTTGCAGCCTTCGCCCATCGTGTCGCTGAACCGCGCCGCCGCGATCGCCATGGTGCAGGGCCCCGGACCCGCGCTCGCCCTCGTCGACGCGCTGGCGGCCGGCGGTGAGCTCGACCGCTATCACCTCCTGCACGCCGCACGCGCCGACTTGCTGCGGCGCCTCGGCTCGGCGACGGAGGCTGCGAAGAGCTACGCGCGGGCGCTGGCGCTGGTCACCAACGACGCCGAGCGACGCTTTCTCGAGCGCCGCCTGCACGAAGTCACGTCAGGCGCCACCTGA
PROTEIN sequence
Length: 420
VEQALGANAAVDLVYRSDWGRIVATLIRLVGDFDVAEEAAQEAFATAVDQWPVSGVPDVPRAWIIQTARHKAIDRIRRRVRFDEKLDAYASELTPIVEEPDYDPDQIPDDRLRLIFTCCHPSLSLEAQVALTLRTLGGLETDEIARAFLVPVATMAQRLVRAKGKIRDAGIPYSVPDTKDMPGRLDAVLTVIYLVFTEGYAATRGDALVRTDFCAEAIRLARLVRTLMSPGPPSEATALLALMLLHDSRREARLDDAGDLVLLEDQDRDRWNHPQIGEALPLVEEALRGGPGPFAVQAAIAALHCQATRAEDTDWAQIVGLYDLLERLQPSPIVSLNRAAAIAMVQGPGPALALVDALAAGGELDRYHLLHAARADLLRRLGSATEAAKSYARALALVTNDAERRFLERRLHEVTSGAT*