ggKbase home page

13_1_40cm_2_scaffold_218623_1

Organism: 13_1_40CM_2_Cyanobacteria_61_4

partial RP 7 / 55 MC: 1 BSCG 3 / 51 ASCG 6 / 38 MC: 1
Location: comp(580..1296)

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS4 family protein n=1 Tax=Calothrix sp. PCC 6303 RepID=K9V7H5_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 237.0
  • Bit_score: 292
  • Evalue 3.00e-76
transposase IS4 family protein similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 237.0
  • Bit_score: 294
  • Evalue 3.70e-77
Transposase IS4 family protein {ECO:0000313|EMBL:AFZ03649.1}; Flags: Precursor;; TaxID=1170562 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 6303. similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 237.0
  • Bit_score: 294
  • Evalue 1.90e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Calothrix parietina → Calothrix → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 717
GTGTTGGACGGGCACTTTGGTAACCACAACGCTGTACAGATGGCGCGGCAGAGAAACCTGCACCTGATTTCCAAGCTGCGGTGTGATGCGGCTCTCTACTTCCCCTACACCGGCCCCTATGCCGGACGGGGGCCCCGGCGCAAATATGGCCGCAAGATCGATTACAACAACCTCCCAGGGCATTACCTCAAAGAGACAATGGTGGAGGGGCACATCGAGACCCGTGTGTACCAAGTCCAACTGCTGCACAAGGAATTTGCGCAACCGTTAAATGTGGTCATCATCGCCAAGATCAATCTGCGCACCCAGGCTCGTGCCCATGTCATCCTCTTCAGCAGTGACTTGGCCCTCGCATACGCACCGCTCGTGGACTATTATGGTCTACGGTTCCAGATTGAGTTTAACTTTAGGGATGCTAAACAGTACTGGGGCTTGGAAGACTTCATGAACGTCACCCCTACCGGGGTCACCAATGCGGCGAATCTGGCGCTGTTCATGGTCAATGTGGCATATCGCCTCCGGACTAACCTCCATCCACATGCTCCAGACTACAGCGTCCTGGACTTGAAAGCCGACTGTCGCGGCTTCAAATATGTGGAGGAGACGATAAAAATGCTTCCGGAAAAACCGGAGCCCGTTTTATTAGACCAGATTCTCCACAAAGTGGCCAGCTTAGGCCGTATTCACGTGTCTCAACCTGTTTTCAGCTTTTCGTAG
PROTEIN sequence
Length: 239
VLDGHFGNHNAVQMARQRNLHLISKLRCDAALYFPYTGPYAGRGPRRKYGRKIDYNNLPGHYLKETMVEGHIETRVYQVQLLHKEFAQPLNVVIIAKINLRTQARAHVILFSSDLALAYAPLVDYYGLRFQIEFNFRDAKQYWGLEDFMNVTPTGVTNAANLALFMVNVAYRLRTNLHPHAPDYSVLDLKADCRGFKYVEETIKMLPEKPEPVLLDQILHKVASLGRIHVSQPVFSFS*