ggKbase home page

13_1_40cm_2_scaffold_313621_2

Organism: 13_1_40CM_2_Cyanobacteria_61_4

partial RP 7 / 55 MC: 1 BSCG 3 / 51 ASCG 6 / 38 MC: 1
Location: 175..573

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 132.0
  • Bit_score: 185
  • Evalue 6.70e-44
Ribonuclease VapC n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EMW1_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 132.0
  • Bit_score: 185
  • Evalue 4.80e-44
twitching motility protein PilT similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 132.0
  • Bit_score: 179
  • Evalue 5.70e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leptolyngbya sp. PCC 7375 → Leptolyngbya → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGATCTATCTGCTCGACACGAACATCTGTATCTATCTGATCAAGCGCCGTCCACCCCAGGTGCTGGAGCGCTTTCGGCGCTGTGCGGTGGGGGACATCGGCCTCTCCACGGTGACGCTGGCGGAACTCCAGTACGGTGTGGCCAAGAGCCTGTTTCCGGCACAGAATCAGCAGGCTCTGGACGCCTTTACCCTGCCGTTGGAGGTGGTCGCCTTCGATGCGGCGGCCGCGGTCGCATATGGCTCAGTACGGGCCGCTCTGGAACGCCAGGGGACCCCGATTGGGGCCCTCGACCTCCTGATCGCGGCCCATGCACTCAGCCTGGGCGTCACCCTGGTGACCAATAACCCACGGGAATTCAGCCGGGTGTCTGGACTCCGGGTCGAGAATTGGGTGTAA
PROTEIN sequence
Length: 133
MIYLLDTNICIYLIKRRPPQVLERFRRCAVGDIGLSTVTLAELQYGVAKSLFPAQNQQALDAFTLPLEVVAFDAAAAVAYGSVRAALERQGTPIGALDLLIAAHALSLGVTLVTNNPREFSRVSGLRVENWV*