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13_1_40cm_2_scaffold_356463_4

Organism: 13_1_40CM_2_Cyanobacteria_61_4

partial RP 7 / 55 MC: 1 BSCG 3 / 51 ASCG 6 / 38 MC: 1
Location: comp(1582..1803)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 63.0
  • Bit_score: 81
  • Evalue 4.40e-13
ECF subfamily RNA polymerase sigma factor id=4197918 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 62.0
  • Bit_score: 76
  • Evalue 1.80e-11
rpoE; ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 60.0
  • Bit_score: 68
  • Evalue 1.00e-09

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 222
GCGCTGACCTCGGCGATCAACGAATTGCCCCCCGTCGCTCGGACCGTGCTGGTCCTGCGCGACGTCGAGGGCCTGTCGAATCTCGAGATCGCGAAAGTCTTGGGCCTCAGCATCCCCATCGTGAAGTCTCGCGTGCACCGCGCCCGGCTGTTTCTCCGGAAACAGCTAGGCGATGCGATGACGACGTTGGGTGCAACGACAGCCACTCCATGCGATTCGTGA
PROTEIN sequence
Length: 74
ALTSAINELPPVARTVLVLRDVEGLSNLEIAKVLGLSIPIVKSRVHRARLFLRKQLGDAMTTLGATTATPCDS*