ggKbase home page

13_1_40cm_2_scaffold_53440_4

Organism: 13_1_40CM_2_Cyanobacteria_61_4

partial RP 7 / 55 MC: 1 BSCG 3 / 51 ASCG 6 / 38 MC: 1
Location: comp(1441..2562)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 373.0
  • Bit_score: 542
  • Evalue 3.60e-151
RNA-splicing ligase RtcB n=2 Tax=Geobacter metallireducens RepID=Q39V74_GEOMG similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 373.0
  • Bit_score: 537
  • Evalue 8.30e-150
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 373.0
  • Bit_score: 537
  • Evalue 2.30e-150

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_PLX_64_10 → Bacteria

Sequences

DNA sequence
Length: 1122
GAGGTCCGCCCGCGCATCCGCGAGCTCGTCGACGCGCTGTTCGCGCGCGTGCCGGCCGGCGTCGGGACCAAGGGGCTCGTGAAGCTCGGCGAGTCGGAGCTCGGCGATGTGCTCGAGCAGGGCGCGGGCTGGTGCCGCCGCCGCGGCTTCGCGACCGAGGAGGACCTCGACCGGACGGAGGAGCGCGGCTGCTTCGCCGGTGCCGACGTCGCGAGGGTGAGCCCGCGCGCGCTCGAGCGCGGCGGAAATCAGCTCGGCACGCTCGGCTCGGGCAACCACTATCTGGAGATCCAGGTGGCGCGTCCCGAGGGTATCGCCGATCCCGACCTCGCGGCCCGTTTCGGGATCTCGCGGCCGAATCAGGTGGTCGTCATGTTCCACTGCGGGAGCCGCGGATTCGGCCACCAGGTGGCGACGGACTACCTCGAAGTCTTCCTCCACGCGATGAAGACGAAGCACCGCCTGGAGATCGCGGATCGCCAGCTCGCGTGCGCGCCGTTCCGGTCGCGCGAGGGGCAGAACTACTTCGCGGCGATGAAGTGCGCGGTCAACATGTCGTTCGCCAACCGCCAGCTGATCCTGCACCGCGTGCGCGAGGTGTTCGAGTCGGTCTTCCACCGGGCACCGGCGGACCTTGGCATGGAGATGGTCTACGACGTTGCGCACAACACGGCGAAGCTCGAGACGCATCGGGTGGACGGCGAGCCCCGCGAGCTCCTGGTGCATCGGAAGGGCGCCACGCGCGCCTTCGGCCCCGGCATGCCGGGTCTCCCGCCGGAATATGCCGAGACCGGCCAGCCGGTGATCATCGGTGGCAGCATGGAGACCGGGTCGTATCTCCTCGCCGGCGTCCCGAGCGGGGCGGCCGCCTTCTACAGCACCGCGCACGGCAGCGGACGGACGATGAGCCGGACGAAGGCGCGGAAGCTGTTCCCGGGTCGCGACCTCGAGCGGCGCCTCCTGGCGCACGGCATCTACGTGCGCGCGACGTCGTACGCAGGGCTCGCCGAAGAGGCGGGCGGCGCCTACAAGGACATCGACGCGGTGGTCGAGGCGACGGCACGCGCCGGGCTCAGCCGTCCCGTCGCCCGCTTCACGCCGATCGGCAACGTCAAGGGTTAG
PROTEIN sequence
Length: 374
EVRPRIRELVDALFARVPAGVGTKGLVKLGESELGDVLEQGAGWCRRRGFATEEDLDRTEERGCFAGADVARVSPRALERGGNQLGTLGSGNHYLEIQVARPEGIADPDLAARFGISRPNQVVVMFHCGSRGFGHQVATDYLEVFLHAMKTKHRLEIADRQLACAPFRSREGQNYFAAMKCAVNMSFANRQLILHRVREVFESVFHRAPADLGMEMVYDVAHNTAKLETHRVDGEPRELLVHRKGATRAFGPGMPGLPPEYAETGQPVIIGGSMETGSYLLAGVPSGAAAFYSTAHGSGRTMSRTKARKLFPGRDLERRLLAHGIYVRATSYAGLAEEAGGAYKDIDAVVEATARAGLSRPVARFTPIGNVKG*