ggKbase home page

13_2_20cm_2_scaffold_189885_3

Organism: 13_2_20CM_2_Nitrospirae_61_4

partial RP 40 / 55 MC: 12 BSCG 33 / 51 MC: 8 ASCG 9 / 38 MC: 2
Location: comp(856..1323)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor, sigma-24 homolog n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PE20_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 155.0
  • Bit_score: 173
  • Evalue 2.20e-40
putative RNA polymerase sigma factor, sigma-24-like protein similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 155.0
  • Bit_score: 173
  • Evalue 6.30e-41
Putative RNA polymerase sigma factor, sigma-24 homolog {ECO:0000313|EMBL:CBK41479.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitro similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 155.0
  • Bit_score: 173
  • Evalue 3.10e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 468
CTTGCCCTCCGAATTTTGAACAACCGCGATGAGGCTTCAGAACTGCTCCAAGATGTCTACATCGAAGCCTGGCGCAAGGCTGGAAGCTTTGATCCAAAACGCGGCTCGCCCATGGCATGGCTCATCACCCTGACGCGCAGCCGAGCGATCGATCGGTTGAGGGGATCGGCTTCGCGCGGTCGGAATCTCACCGATTCGATCGATGAGACCTCAGACGACCTTCGTAGCGTGCTGCCTGATCCGTTTGACACTCACGCCCTCGAAGAATTGCGCATGCTCGTGATGGAGGCGTTCAAGGACCTCCCGGCGCCGCAACAGGAGGCGATCGAGCTCGCGTTCTACGGGGGACTCACGCATGCCGAGATTGCGGCCAAGCTGGATAAGCCTATCGGCACGGTCAAGACCCGGATTAAATTGGGGATGAACAAGCTGCGCTATGCGTTACGACCTTGCTGGGAGGCAAAGTAA
PROTEIN sequence
Length: 156
LALRILNNRDEASELLQDVYIEAWRKAGSFDPKRGSPMAWLITLTRSRAIDRLRGSASRGRNLTDSIDETSDDLRSVLPDPFDTHALEELRMLVMEAFKDLPAPQQEAIELAFYGGLTHAEIAAKLDKPIGTVKTRIKLGMNKLRYALRPCWEAK*