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13_2_20cm_2_scaffold_38870_7

Organism: 13_2_20CM_2_Nitrospirae_61_4

partial RP 40 / 55 MC: 12 BSCG 33 / 51 MC: 8 ASCG 9 / 38 MC: 2
Location: comp(5498..6061)

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 192.0
  • Bit_score: 207
  • Evalue 3.60e-51
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969, ECO:0000313|EMBL:CBK43979.1}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 192.0
  • Bit_score: 207
  • Evalue 1.80e-50
Transcription-repair-coupling factor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8Z7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 192.0
  • Bit_score: 207
  • Evalue 1.30e-50

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Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 564
AGAGAACAGTCAGGGCATATTGGCGCGGTAGGATTTGAGCTTTACATGCAGATGCTCGGGCAGGCCGTACGGGAACTCAAAGGCCAAGTCGTGGTGGAGCAGGCCGAACCCACCCTCCAGCTTCAAGTCTCCGCATACATTCCCGACGATTACGTGGATGACACCTCACAGCGCCTCTCCTTATACAAACGCCTGTCGTCGAGCGGCCAGACAGGAGACTTGGCGCAACTGCATGGCGAGCTGCTCGACCGATACGGGCCGGTACCGGAGCCCGTTGAGCGGCTGTTCGAGGTGATGGAGATTCGCCTGCTGGCTAAAGCCGCGCGCGCGCGCGCCGTCCAGGTAAATCCCGGGATGATTGCATTCAGTTTCGACCCCAATCTTTTACCACCACAGGAGGCAGTCCGTCCGCTTATGGATCGCTATCGCAGCAAGCTGCGTTTTACTACGCCCTACGCGTTTCAGTTGCAACATGAGGACCAGACATGGAAGAGTATCTTCCAGGAGATCAAAAGAACCTTGCAAGTGCTTGGAGGCTATGATAAAAATCCGAAAACTACCTGA
PROTEIN sequence
Length: 188
REQSGHIGAVGFELYMQMLGQAVRELKGQVVVEQAEPTLQLQVSAYIPDDYVDDTSQRLSLYKRLSSSGQTGDLAQLHGELLDRYGPVPEPVERLFEVMEIRLLAKAARARAVQVNPGMIAFSFDPNLLPPQEAVRPLMDRYRSKLRFTTPYAFQLQHEDQTWKSIFQEIKRTLQVLGGYDKNPKTT*