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13_2_20cm_2_scaffold_68635_1

Organism: 13_2_20CM_2_Nitrospirae_61_4

partial RP 40 / 55 MC: 12 BSCG 33 / 51 MC: 8 ASCG 9 / 38 MC: 2
Location: 3..977

Top 3 Functional Annotations

Value Algorithm Source
rluD2; 23S rRNA pseudouridine synthase (EC:4.2.1.70 5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 308.0
  • Bit_score: 366
  • Evalue 5.20e-98
rluD2; 23S rRNA pseudouridine synthase (EC:4.2.1.70 5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 315.0
  • Bit_score: 359
  • Evalue 9.90e-97
Pseudouridine synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA98_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 315.0
  • Bit_score: 359
  • Evalue 3.50e-96
  • rbh

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Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 975
CGTGACTGTTTCAGCGCCTCGCGGCTGATGAACCAAGTTCTGACCGTCTCCGCTGGCGAACATCCTAAGCGCCTCGACCTCTTCCTCAGCGGCCACACCTCAGGATTATCGCGGGCCGGAGTTCAGCGCCTTATTGAGAACGGAGCCGTCACGGTCAACGGGAGGCGGCCGAAGCCGTCATTGAAGATACGGCCTGGTGACCAGATCGTCTGGGATACGCCCAAGCCGACCCCGCTCGAGATCGAAGGCGAAGCAATCCCCTTGGATGTTCTATTTGAGGATGGATCATTGTTGGTCCTCAACAAACCCGCGGGCATCGTCGTCCATCCGGCTCCCGGCCACTGGCGGGGGACGCTCGTCAACGCGCTCTTGCATCATCTCAAGGATGGAGGTCTTTCGGGCATCGGCGGGCGCGAGCGGCCAGGGCTCGTTCACCGTCTCGACAAAGGAACCAGTGGTGTGATGGCGATCGCCAAGACAGACGCCTCGCATCGAGGGCTCTCGAAACAATTCAAGGACCACACGATTCGGCGGATCTATCTGGCGTTGATTGCCGGCACTGTGAAGGGAGCAAAAGGACGGGTGGAGCTCCCGATCGGCCGTGACACCAAAAACCGCCAGAAGATTTCGACCCGCACCAGCTCTCCCCGGGAGGCGGTCACCGAGTTTCAGGTGCTTGAGCGCTTTGGCAAGACCGCGACGCTCGTAGAGGTTCAACCGCAGACCGGCCGCACGCATCAAATCCGGGTCCATCTCGCTTCAGTTGGGCATCCGGTGCTGGGTGATGAAACCTATGGCGGACGTAAAGTCTGTCTTGCCGATGATCATCCCATCGAACGACCGATGTTGCATGCGCGAACCTTGGGGTTCACCCATCCGCTGACCGGCGAGTATCTTGAATATTCCGTACCGCCCCCCCCTCATATGGAAGGAATCATGAGGGTGCTTGCGCATACCTTGGACAAGGACTCGTGA
PROTEIN sequence
Length: 325
RDCFSASRLMNQVLTVSAGEHPKRLDLFLSGHTSGLSRAGVQRLIENGAVTVNGRRPKPSLKIRPGDQIVWDTPKPTPLEIEGEAIPLDVLFEDGSLLVLNKPAGIVVHPAPGHWRGTLVNALLHHLKDGGLSGIGGRERPGLVHRLDKGTSGVMAIAKTDASHRGLSKQFKDHTIRRIYLALIAGTVKGAKGRVELPIGRDTKNRQKISTRTSSPREAVTEFQVLERFGKTATLVEVQPQTGRTHQIRVHLASVGHPVLGDETYGGRKVCLADDHPIERPMLHARTLGFTHPLTGEYLEYSVPPPPHMEGIMRVLAHTLDKDS*