ggKbase home page

13_1_40cm_4_scaffold_20288_8

Organism: 13_1_40CM_4_Chloroflexi_69_19

partial RP 7 / 55 BSCG 8 / 51 ASCG 4 / 38
Location: comp(5381..6028)

Top 3 Functional Annotations

Value Algorithm Source
SAF-like family protein n=1 Tax=Nocardiopsis halotolerans RepID=UPI0003489509 similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 224.0
  • Bit_score: 87
  • Evalue 1.70e-14
Flp pilus assembly protein CpaB Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 212.0
  • Bit_score: 201
  • Evalue 1.10e-48
SAF-like family protein similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 218.0
  • Bit_score: 72
  • Evalue 1.60e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 648
TTGATCGGACAGCGCGCGCTGATCGGGCTCGCGGTCGCATCCGGCCTGCTCGCCGGTGTGCTCTATTACGCGGGCGCCCAGCGCTCCCCAGTGATCGTCGCAGCACGCGACCTCGACGCGACGCATCCGCTCACCGCCGATGACCTCGCGACCGCATCGCTCCCCCCGGATGCCGTGCCAGCTGGCTCCGTCGCCGATGTCTCTGCCGCCCTCGGCAAGATCCCGCGGGCGCCGCTCTGGCGCGGCCAGGTCGTGCTCGCCGCGGGCCTCACCGAGGACGCCGCCGCGTTCCACACCGGTCTCGCGCTGCCGCGAGGGATGCGCGCTGTGGCCTTGCCGATGGGCGCGGCCCAGGCGGTGGGTGGCGCGCTCGTACCCGGCGCCCGTGTCGACGTCCTCGCCGTGCCCGTGGGTGGTCGCGCGCCTGCGGGGCGCGCGACCGAGCTGCTCGCGCAGGCCGCGATCGTCCTCGACGTTCGCGCGGACACCGGCGCACCGTACGGCGGGTCGATCGCGAAGAGCCCGACCACATACGCGACCGACAGGATCGGCAGCGTCGTGATCGCCATCGACCCGGCGGACGAGATCAAATTCGCTGACCGAATAGCGACGAGCACGTTCATCCTCACTCTCGTCGGGTCACGCTGA
PROTEIN sequence
Length: 216
LIGQRALIGLAVASGLLAGVLYYAGAQRSPVIVAARDLDATHPLTADDLATASLPPDAVPAGSVADVSAALGKIPRAPLWRGQVVLAAGLTEDAAAFHTGLALPRGMRAVALPMGAAQAVGGALVPGARVDVLAVPVGGRAPAGRATELLAQAAIVLDVRADTGAPYGGSIAKSPTTYATDRIGSVVIAIDPADEIKFADRIATSTFILTLVGSR*