ggKbase home page

13_1_40cm_4_scaffold_25465_4

Organism: 13_1_40CM_4_Chloroflexi_69_19

partial RP 7 / 55 BSCG 8 / 51 ASCG 4 / 38
Location: 4025..5734

Top 3 Functional Annotations

Value Algorithm Source
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 567.0
  • Bit_score: 821
  • Evalue 1.00e-234
Single-stranded-DNA-specific exonuclease id=4958485 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 503.0
  • Bit_score: 440
  • Evalue 3.60e-120
single-stranded-DNA-specific exonuclease RecJ similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 580.0
  • Bit_score: 418
  • Evalue 2.40e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1710
ATGGGCCTCGTGGCGCAGCGTCGCTGGATCATGCCCGCACAGCGGATCGGGGATGTCCCCGATGGTATCCCCGCGCTCGTCGCGCGGATCCTCGCCGGGCGGGGCATCGGCGCAAGGGAAATGGCGGACTTCCTGGCGGCCCGGGTCGCGACGGAGGAGGGCCCGCCGATGCGCGATCTGGACCGGGCGGTCGAGCGGCTCCACCGTGCGCTCGCGGCTCGCGAGCGCATCGTCGTCTACGGGGACTACGACGTCGACGGCATCGCCGGCTCGGCGATCCTCGTCCGTGCGTTCCGCCAGCTCGGCGCGGTCGTCGGCGCGTACATCCCGAACCGCTACGAGGAGGGGTACGGCCTCAACGGCGAGGCGCTCCGCAAGCTCGCCGCGGACGGGACGCGCGTCGTCGTGTCCGTCGACTGCGGCGTCACCGCCGTGCGCGAGGCCTTGCTCGCGCGCGAGCTCGGCATCGATCTCATCATCACCGACCACCACCATCCGCCGGCGGTCCTGCCCGAGCCATACGCGCTCGTGAACCCGCGCCGCGCGGGCGACCCGTCACCCGACAAGGATCTCGCCGGCGCCGGCGTCGCGCTCGTCCTCGCGAGACACCTCCTCGGCGAGCTCGGCTACGCGCTCCGCGAGTCGGAGCTCCTGCAGCTCTGCGCCCTCGCGACCGTCGCCGACGTCGTGCCGCTGCGCGGGGCGAACCGCGCGCTCACGCGCGCCGGCCTCGACGCGCTGAACAAGGCCCCACTCACGGGGGTCCGCGCGCTCGTCGAGCGCGCCGGGTTGAAGCTCGGTGGCGTCGGCGCGCAGGAGATCGGCTTCGTGCTCGGACCGCGCCTCAACGCCGCGGGCCGGATCGCGGATGCCGAAGACGCGCTGCGTCTCCTGCTCACCGAGGATCCCGCGGAGGCGAAGGATCTTGCGGAGACGCTCGAGGTCCGCAACGCGGACCGGCAGGAGCTGACGCGCCTGGTGGTCGCAGCGGCCCGCGAGCGCGCGGCCGAGCGGCCGGACGCGTGGGCGACCGTCGTCGCCGATCCCGGCTGGTCGGCGGGGATCGTCGGCCTCGCCGCCTCGCGCCTCGTCGAGGACTACGGCCGGCCCGCGGTCGTCATCGCGGTCGACGGCGCGGAAGGCAAAGGCTCGTGCCGGTCGATCGCGGGGGTGCACATCGCCGAAGCGCTCGACGAATGCGACGACATCCTGTCAAAGCATGGGGGACACGCCATGGCCGCGGGCTTCTCCGTCCCGGTCGAGCGGATCGGAGAGCTCACCGAGCGCCTCGACGAGGTCGTGCGCCGCCGGCTCGCCGGGGTCCGGCCCGTGCCGTCGCTCCGCGTCGACGCCGAGATCGCGGCCGAGGCGCTCACCTCGCGCCTCGCGCTCGAGCTGGCGACGCTCGAGCCGTGCGGCGCCGGGAACCCTCGGCCATACCTTCTCGTGCGCGACGTCCGCGTGTACGACATCCGCCAGGTCGGCGCCGACAGCGACCACCTGCGCTGCAAGATCACCGTCGGCCGCTTCACGTTCGACGCGATGGCGTTCCGCCGCGGGGGACACGCCGCCGACATGACCGATGCCGGCCGCGTGGACGCGGTGGTCTCGGTGGGCACCGGCCTGCGCGGGTTCGTGGAGCTCGAGCTCCGCGACTTTGGCCCGGTCGGGACCGCCGCGCGGATGCTGCAGGAACCGGTGCTCGCGTAA
PROTEIN sequence
Length: 570
MGLVAQRRWIMPAQRIGDVPDGIPALVARILAGRGIGAREMADFLAARVATEEGPPMRDLDRAVERLHRALAARERIVVYGDYDVDGIAGSAILVRAFRQLGAVVGAYIPNRYEEGYGLNGEALRKLAADGTRVVVSVDCGVTAVREALLARELGIDLIITDHHHPPAVLPEPYALVNPRRAGDPSPDKDLAGAGVALVLARHLLGELGYALRESELLQLCALATVADVVPLRGANRALTRAGLDALNKAPLTGVRALVERAGLKLGGVGAQEIGFVLGPRLNAAGRIADAEDALRLLLTEDPAEAKDLAETLEVRNADRQELTRLVVAAARERAAERPDAWATVVADPGWSAGIVGLAASRLVEDYGRPAVVIAVDGAEGKGSCRSIAGVHIAEALDECDDILSKHGGHAMAAGFSVPVERIGELTERLDEVVRRRLAGVRPVPSLRVDAEIAAEALTSRLALELATLEPCGAGNPRPYLLVRDVRVYDIRQVGADSDHLRCKITVGRFTFDAMAFRRGGHAADMTDAGRVDAVVSVGTGLRGFVELELRDFGPVGTAARMLQEPVLA*