ggKbase home page

13_1_40cm_4_scaffold_37432_8

Organism: 13_1_40CM_4_Chloroflexi_69_19

partial RP 7 / 55 BSCG 8 / 51 ASCG 4 / 38
Location: 5341..5934

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 186.0
  • Bit_score: 180
  • Evalue 1.90e-42
RNA polymerase sigma-70 factor, ECF subfamily id=2777671 bin=GWC2_Chloroflexi_73_18 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 175.0
  • Bit_score: 154
  • Evalue 1.00e-34
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 190.0
  • Bit_score: 142
  • Evalue 1.50e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 594
GTGCCTAACACCCCAGTCCCGACCCCCGTTAGCCCGGACGGAGCCGAGGGCGGGGACGCCAGCCTCGCCATTCGTGCCGGAAAGGGGGACACGGCCGCCTTCGGGGCGCTGTACGACCGCCACGTCGAGGCTGTGTACCGCTACGTGTACTACCGGGTAAGGAACGATGCGGACGCGGAGGATCTGACGAGCGACGTGTTCATGCGGGCTCTTCGCGCCATTTCGCGCTACGAGCCGCGGCAGGCGTTCCTCGCCTGGCTTTACCGCATTGCCCGCAACGCCGTTATCGATCGCTCTCGCCGTACCCGGATCCAGATCAGCTTCGAAGACGCGCTCGCACATCCCGGAGTCGACCAGGTGGTGGAGCCCGACTCCGCGCTCCTCGCTCTGTCCGACAAGGAGGCCGTGCGCGAGGCGCTGTCGCGGCTGACGCCACTCCAGCAAGAGGTCATCGTCCTGCGTTTCGTTGAGGGATACAGCACGCAGGAGATCGCCGCGTTCGTGGGCAAGCGCGAAGGGACCGTCCGCGGCATCCAGTTCCGCGCTCTCGAAGCGCTGCGCACGCTCATCCCGTCGCGCGAGGCGCTCGCATGA
PROTEIN sequence
Length: 198
VPNTPVPTPVSPDGAEGGDASLAIRAGKGDTAAFGALYDRHVEAVYRYVYYRVRNDADAEDLTSDVFMRALRAISRYEPRQAFLAWLYRIARNAVIDRSRRTRIQISFEDALAHPGVDQVVEPDSALLALSDKEAVREALSRLTPLQQEVIVLRFVEGYSTQEIAAFVGKREGTVRGIQFRALEALRTLIPSREALA*