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13_1_40cm_4_scaffold_209_6

Organism: 13_1_40CM_4_Actinobacteria_65_12

partial RP 17 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 6 / 38
Location: comp(6384..9905)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RBG_16_Chloroflexi_64_32_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 999.99
  • Bit_score: 859
  • Evalue 4.20e-246
Transcription-repair-coupling factor n=2 Tax=Chloroflexus RepID=A9WHG9_CHLAA similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 999.99
  • Bit_score: 818
  • Evalue 9.90e-234
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 999.99
  • Bit_score: 818
  • Evalue 2.80e-234

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Taxonomy

RBG_16_Chloroflexi_64_32_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 3522
ATGAGCGCGCTAGGTCAGCAAGCCCTAGACGTGGCGCCCGGGCTGCGCCGGTGGGTGACACAGGGTGAAGGTGAGCTGCGCGTTGCACGCTTGCCCCGACCAGCTTGGCCGATCGTGGCGGGCGCGGTCGCACGTGCCCTGGCGGACGCGGGCCGCTCGGTTCTGATCCTCGCGCCGGCACCGGACCGCTTCTGCGACGACCTGAGGCCCTGGCTCGCAGGCCGGCCTGCGGCATTCGTCTTCGCGGAGGTCGCGGTCTCTTTTCTCGACCGGCCGCCGGCGTTCGACGATTCGGTCGACAAGCGTCTGGAGGCTCTGAATGCGCTCGCGGACCGTACATCACCAAGCGTCGTCGTGTCATCGCGGCGCGCTATCACGCGCGCGACCATCTCGCCCGCTGACCTGGCCCAGGGGACTTTGGTCCTTGCGCCGGGGAGCGGGCCCGACCCCGTCGTCGCGGCCGCTCGGCTCGTCGAGATGGGCTACTCGCGCGAGCTGCTCGTCGAAGAGCATGGTCAGTTCTCGCTGCGCGGCGGAATCCTCGACGTGTTCCCGGCCGCATCCGACTCGCCGGTACGAGCCGAGTGGTCGGGCGACGTCATCGATACGCTCCGCCTGTTCGACTCGGAGAACCAGCGCTCGGTGATGGCGGTGCCACGAGTTGCGATCCACCCTGGTCGCGAGCTGTTGTTTGGCCCGCGCCGGGGAGCGGCAGCCGCCAACCGTCTCCGCCAGGGTGTGTCGCTCGACCGCCTGCGCGCGGACGTCCGGGCGGACTGGGAGGAAGAGCTCGAGCGTCTTGAGGCGGGCGGCGCATTTCCGGGCATCGAGTTTTACTCGGGCTATCTGGATCCGTCGCTGCCATCCCTGCTCGAGCACCTGCCCACGGGCCTCGCGGTCGTCGACATCGAGCCCGGTCGTCAGCTTGCAGATGCGCGAGTGCTCGTCGAAGAGACAGAGATACTCGCCGCCGCCGAAGCCGCTGGCGGGGAGCTTCCGCACCGGTTTGCGCTGCCGATGGTCAGTGCGGAGAGGCTGCAAACGGGCACCGGCCATCCGCGCCTCGAGCTCACGGCTGGAGAGGGGGCCGACGGCGCCATCGACCTCGGGTGGATGGAGGCCGAACCGCTTGTGGGCCGGCCACGGGCTGCAGCCGAGCTGGCCGATCTCGCGGGCTCGATGACGGTGGCCGTCGCCACCGAGCAGACGGAGCGCCTGCGGACTTTCCTCGAAGAGGGCGGCGTTCGCGAGCGACCTCGGGAGATCGAGCTCGACCTCGATCTTCCGCTCGAACCAGGGCTGGTGCAGGCCGACATGGACATCGCGGCCGGATGCGTGCAGCCGGCGATCGGATTCCACCTCGCGACCGATGCCGAGCTCTTCGGGCGGCTGCGCCGGCCGGGCCGGCCTACCCGGTCATCTCGCGCCCGTGCCGACCAGCTGACACGCGAGTTCACGCTGGACTTCGCTCCGGGCGAGCTTGTGGTCCACGTCGACCACGGGATCGCACGCTTCGCGGGCATGCGCCTTCTGGAGTCGGATGGCGCGCATCGCGAGTACCTCGAGCTCGAATACGCCGAGGCGGACAAGCTGTTCGTGCCGGTCGAGAACCTGGACCGCGTCCAGAAGTTTCTTGGCGGCGAGGGCGAGCCGGCGCTGCATCGACTCGGAACCGGCGATTGGTCACGGGCGCGAGGCCGCGCGCGCAAGGTGGTCCAGGACGTGGCCGAGGAGCTGTTGAAGATCTATTCGCTGCGCGAGGCGAGGCCGGGCATCGCATTCGCGCCGGACACCGCCTGGCAGCAGGAGCTCGAGTCGTCCTTTCCTTATGAGGAGACGGCTGACCAGGTGGCGGCGCTCGCCGAGATCAAAGCGGACATGGAGTCCGACCGGCCCATGGACCGGCTGCTCTGCGGCGACGTCGGGTTTGGCAAGACCGAGCTGGCGCTGCGGGCGGCATTCAAAGCGTCGATGAGCGGCAAGCAGGTGGCGCTGCTTGCGCCGACCACGGTCCTGGCGCAGCAGCACTACCACGTCTTCACTCAACGACTCGACAAGTTTCCGGTGACGATCGAGATGCTGTCGCGATTCGTGGACCACGAAACGCAGGCCCGCACACTGGAAGGGCTGAAGGCCGGGCAGGTGGACATCGTGGTCGGCACGCACCGGCTCCTGCAGCGCGACGTGCGCTTCAAGCGTCTCGGCCTCTTGATCGTCGACGAGGAGCACCGCTTCGGCGTCATGCAGAAGGAGCGGTTGAAGAAGCTGCGCACGCAGCTCGATGTGCTGTCGCTTTCAGCGACGCCGATACCACGCACGCTGCACATGGCTGTCGGCGGCATTCGCGACATGAGCGTCATCCAGACTCCGCCCGAGGAGCGGCAGCCGATCAAGACGTACGTTACGGCCGACACGCTAGAGGTCGTTCGCGAGGCGATCATGCGTGAGCTTCAGCGGGGCGGCCAGGTCTACTACGTGCACAATCGCGTGCGCACGATCGAGAAGGCCGCCGATCGGGTCCGCGACCTTGTGCCAAGTGCCCGGGTCATCGTCGGCCACGGGCAGATGCCGGAAGACCAGCTGGCGCGGGTGATGGTCGAGTTTGAATCGGCGAAGCACGACGTGCTGGTGTGCTCCACGATCATCGAGTCCGGATTGGACATTCCGAACGTCAACACGATCATCGTCGAGCGCGCGGACCGGTTTGGGCTCGCACAGCTGTACCAGCTGCGCGGTCGCGTCGGACGTTCAGGCCGGCGCGCGTACGCGTACTTCCTATATGACCCTCGTCGCTCGCTCACAGAAACCGCAGACAAGCGGCTCGACGTCATCTCAGGGCTTCACGAGCTGGGGCAGGGCTTCAAGATCGCCCTCCGAGACCTCGAGATTCGCGGCGCCGGCAACCTGCTCGGCACCGAGCAGCATGGCGCGATCGCGGCGGTCGGCTTCGAGATGTATCTGCAGATGCTGCAGAGCGCGGTGGGCAAGCTGCGCACCGGATCAGATGAAACCGCGGTCGGCGACGTCCTCTCGACCGCTGAGATGAACCTCGACCTGCCGCTCGATCACTTCATCCCACGCTCGTACATACGCGACGAGAAGCTGCGTCTCGGGGCTTACCGGCAGCTCGCCGCGACCGATGAAGAGGAGGAGCTGGAATCCGTTCTCCGCTCGCTCGAAGACCGCTACGGGCCCGGACCCGCCCAGCTTGACAACCTGGCGTACTCGCTGAGGGTCAAGCTGCGCGGGCAGCGGCTGGGCCTTCGGGGTGTCGTCGCCGATGGGCACGACATCGTCATCCGCGTCGACCCCCAGCGCTACCTCGACGTCGACGAGCTGGCGCGCAGGATGGCGGGTCGCATTTCTGTCTTTCCCAACCGCATCAAGATGCGCCGCCAGGGCGCCGGGCGCGCGCAGGGCGCACTTCCAGACAATGCCTGGAAGGATGATCTTCTCTTTCTGCTGCGCGAGATGGGTGACCTGTACGAGGCGGGCCGCAACGTCGTGGTAACGAGCGCGTGA
PROTEIN sequence
Length: 1174
MSALGQQALDVAPGLRRWVTQGEGELRVARLPRPAWPIVAGAVARALADAGRSVLILAPAPDRFCDDLRPWLAGRPAAFVFAEVAVSFLDRPPAFDDSVDKRLEALNALADRTSPSVVVSSRRAITRATISPADLAQGTLVLAPGSGPDPVVAAARLVEMGYSRELLVEEHGQFSLRGGILDVFPAASDSPVRAEWSGDVIDTLRLFDSENQRSVMAVPRVAIHPGRELLFGPRRGAAAANRLRQGVSLDRLRADVRADWEEELERLEAGGAFPGIEFYSGYLDPSLPSLLEHLPTGLAVVDIEPGRQLADARVLVEETEILAAAEAAGGELPHRFALPMVSAERLQTGTGHPRLELTAGEGADGAIDLGWMEAEPLVGRPRAAAELADLAGSMTVAVATEQTERLRTFLEEGGVRERPREIELDLDLPLEPGLVQADMDIAAGCVQPAIGFHLATDAELFGRLRRPGRPTRSSRARADQLTREFTLDFAPGELVVHVDHGIARFAGMRLLESDGAHREYLELEYAEADKLFVPVENLDRVQKFLGGEGEPALHRLGTGDWSRARGRARKVVQDVAEELLKIYSLREARPGIAFAPDTAWQQELESSFPYEETADQVAALAEIKADMESDRPMDRLLCGDVGFGKTELALRAAFKASMSGKQVALLAPTTVLAQQHYHVFTQRLDKFPVTIEMLSRFVDHETQARTLEGLKAGQVDIVVGTHRLLQRDVRFKRLGLLIVDEEHRFGVMQKERLKKLRTQLDVLSLSATPIPRTLHMAVGGIRDMSVIQTPPEERQPIKTYVTADTLEVVREAIMRELQRGGQVYYVHNRVRTIEKAADRVRDLVPSARVIVGHGQMPEDQLARVMVEFESAKHDVLVCSTIIESGLDIPNVNTIIVERADRFGLAQLYQLRGRVGRSGRRAYAYFLYDPRRSLTETADKRLDVISGLHELGQGFKIALRDLEIRGAGNLLGTEQHGAIAAVGFEMYLQMLQSAVGKLRTGSDETAVGDVLSTAEMNLDLPLDHFIPRSYIRDEKLRLGAYRQLAATDEEEELESVLRSLEDRYGPGPAQLDNLAYSLRVKLRGQRLGLRGVVADGHDIVIRVDPQRYLDVDELARRMAGRISVFPNRIKMRRQGAGRAQGALPDNAWKDDLLFLLREMGDLYEAGRNVVVTSA*