ggKbase home page

13_1_40cm_4_scaffold_23_34

Organism: 13_1_40CM_4_Actinobacteria_65_12

partial RP 17 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 6 / 38
Location: comp(31285..31512)

Top 3 Functional Annotations

Value Algorithm Source
AsnC family transcriptional regulator n=1 Tax=Actinomadura atramentaria RepID=UPI000378F3DA similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 75.0
  • Bit_score: 77
  • Evalue 4.80e-12
putative HTH-type transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 75.0
  • Bit_score: 76
  • Evalue 3.90e-12
AsnC family transcriptional regulator {ECO:0000313|EMBL:EON23115.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8. similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 74.0
  • Bit_score: 76
  • Evalue 1.90e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 228
ATGAAGGCTTATGTCCTGATCAACGCGTCGCCTGGTCGAGCGCTCGAGGTCGCCAAGAAGATGGAAGGCGTCAGAGGCATCACGGCGGCCGACGCGATCACGGGCGAATACGACGTCATCGCAGTATGTGAGGCCCCCGATGTCAACTCGATTGGGTCATTGATCGTCGACAAGATCCAGAAAATCGACGGCGTGTTCAAAACCGTCACCTGCCTCGCCGTCAAGTAG
PROTEIN sequence
Length: 76
MKAYVLINASPGRALEVAKKMEGVRGITAADAITGEYDVIAVCEAPDVNSIGSLIVDKIQKIDGVFKTVTCLAVK*