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13_1_40cm_4_scaffold_2608_2

Organism: 13_1_40CM_4_Actinobacteria_65_12

partial RP 17 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 6 / 38
Location: comp(385..1419)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor sigA n=1 Tax=Mycobacterium tuberculosis K85 RepID=D6FMY0_MYCTU similarity UNIREF
DB: UNIREF100
  • Identity: 34.7
  • Coverage: 297.0
  • Bit_score: 129
  • Evalue 6.20e-27
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] similarity UNIPROT
DB: UniProtKB
  • Identity: 28.8
  • Coverage: 312.0
  • Bit_score: 106
  • Evalue 7.90e-20
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 28.8
  • Coverage: 312.0
  • Bit_score: 104
  • Evalue 7.90e-20

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Taxonomy

[Clostridium] straminisolvens → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1035
GTGACGATCGCGCGCGCAGCCAAAGTAGCGACCAAGGGTGGGAATCGGGCCGGTAAGGCCCTCGAGAAGCCGGAGCACAAGTTCGAAGACGAGCTGATGGCCGTGGCCGAGCAGCTCATCGTCAAGGGCAAGGAGCAGGGCTACCTGACCCCGGACGACATCCTCCAGGGCTTCCCGGAGATCGACGCCGAGCCGGATCAGATATTCCGGATCTTTGCCGCGTTCAAAGAGATCGGCATAGAGGTCACCGATGGCGAGAAGGATTTCGAAGAGGTCGAGCAGATCGACGACGAGATGCTCCTCGACATCGAGATGATGGATTCGGTCTCGCTGGACGACCCGGTCCGCATGTACCTGAAGGAGATCGGGCGAGTCAGCCTGCTCACGGCCAACGACGAGGTCGAGCTCGCGCAGGCGATCGAGGCCAAGCCCCTCCACGACGCCCTCAAGGCACTGAATGTCATCGAGGAGATCGAGGGGCGCCAGCGCTCCGTCGAGGAGATGCTGCCGGACGTCATCGAACGGCTGAACACGGTCAAGCGCAAGGGCCAGCAGGCGCACATCGCCCAGGAGCTGCTCGGCCTCAACGACCTGACCAAGCTCCAGAACCTGCTCGACGCCGCGGCGGCCGAGCGGCGGCGTCAGGCCAACGGGGCTGCCCGCCCACGGGTTCGTGCCGAAGCGCTCGAGTCCTATCGGATCGCCCGCTACCGGCTGACCGAGCGGTACGAGCGCGCCTACGAGGCGAAGCAGCGGCTGACCGAGGCCAACCTGCGGCTGGTCGTGTCGATCGCCAAGAAGTACCCTCATCCAGGAAGGCAACATGGGCCTGATCCGGGCGGTCGAGAAGTTCGACTACCACAAGGGCTACAAGTTCTCGACCTACGCCACGTGGTGGATCCGGCAGGCCATCACCCGCGCCATCGCCGACCAGGCGCGGACGATCCGCATCCCGGTGCACATGGTCGAGACGATCAACAAGCTGGTCCGCGTATCGCGCCGGCTGCTCCAGGAGCTGGGCCGCGAGCCGAGTGA
PROTEIN sequence
Length: 345
VTIARAAKVATKGGNRAGKALEKPEHKFEDELMAVAEQLIVKGKEQGYLTPDDILQGFPEIDAEPDQIFRIFAAFKEIGIEVTDGEKDFEEVEQIDDEMLLDIEMMDSVSLDDPVRMYLKEIGRVSLLTANDEVELAQAIEAKPLHDALKALNVIEEIEGRQRSVEEMLPDVIERLNTVKRKGQQAHIAQELLGLNDLTKLQNLLDAAAAERRRQANGAARPRVRAEALESYRIARYRLTERYERAYEAKQRLTEANLRLVVSIAKKYPHPGRQHGPDPGGREVRLPQGLQVLDLRHVVDPAGHHPRHRRPGADDPHPGAHGRDDQQAGPRIAPAAPGAGPRAE*