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13_1_40cm_4_scaffold_3417_4

Organism: 13_1_40CM_4_Actinobacteria_65_12

partial RP 17 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 6 / 38
Location: 2822..3436

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family id=15194335 bin=GWC2_NOV_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWC2_NOV_55_46 organism_group=Proteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 36.6
  • Coverage: 172.0
  • Bit_score: 102
  • Evalue 4.90e-19
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWB2_Nitrospirae_47_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 37.6
  • Coverage: 170.0
  • Bit_score: 96
  • Evalue 3.70e-17
sigma-70 family RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 181.0
  • Bit_score: 92
  • Evalue 1.90e-16

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Taxonomy

GWB2_Nitrospirae_47_37_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 615
ATGCCTAGTGTGGCGATCAGGACCGAACCTGAGCTCCCGGCATACAAGCCGGGTTCGCGCGACGACTTCGATCGCCTCTATCGCGACAGCTACGCCAACATCTACCGGACCATGCTCGCGGTCCTGGCCGATCCGGCGGCAGCTGAGGACTGCACCCAGGACACGTTCGTGCAGGCGTTCAGAGCGTGGGCGCGATGGCGACCGGACGCGCCGGCCGAGGCATGGCTGCACAGGATCGCGATCAACGCCGCCGTGTCATACCAGCGGAAGGCGAGCCTGCGGTCGATCGGAGGACTCCTGCGACGGCTTGGCAAGCCTGCTGCCGGCCCAGACCCGGCGCAGGTGGCGCTGGATCGCGACCTGGTGGCGGCGCTCCGCCACCTCTCGCCGAAGCTGCGCGCCGCGATCGTCCTGCGCCATTACCACGGCTACAACAACCGGGAGATCGCCGCGGCGGTCGGGGTTTCGGAGAGGACGGTGAACAAGCGCCTGCGCATCGCCGCCGAGCGAATGAGAGTGCTCCTGGCCGGCGACCCCAAGGTGTTCCCACTTGACAACGCTGGTTCGTTTTCTTCTCAGGACGGACCGCGTACGGCGCGGACGAGACACGAATGA
PROTEIN sequence
Length: 205
MPSVAIRTEPELPAYKPGSRDDFDRLYRDSYANIYRTMLAVLADPAAAEDCTQDTFVQAFRAWARWRPDAPAEAWLHRIAINAAVSYQRKASLRSIGGLLRRLGKPAAGPDPAQVALDRDLVAALRHLSPKLRAAIVLRHYHGYNNREIAAAVGVSERTVNKRLRIAAERMRVLLAGDPKVFPLDNAGSFSSQDGPRTARTRHE*