ggKbase home page

13_1_40cm_4_scaffold_15694_3

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(2089..2727)

Top 3 Functional Annotations

Value Algorithm Source
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 212.0
  • Bit_score: 221
  • Evalue 1.00e-54
two component LuxR family transcriptional regulator id=14430684 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 214.0
  • Bit_score: 203
  • Evalue 2.10e-49
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 209.0
  • Bit_score: 186
  • Evalue 9.80e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_59_13 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGCCGGTTCGTGTGGTCTTGGCTGACGATCACCTGGTGTTGCGGCAAGCCCTGAAAGCATTGCTGGAGCACCGAGGGTTGGAGGTCGTGGCCGATGAGGCGGATGGCCGGGCGGCAGTTGATGCCGTCCAGCGCCATGCTCCCGACGTTGCGGTTTTGGACGTCGCCATGCCGGTGCTGAACGGTGTGGACGCCGCCCGCGAGATCGCCCGTATTGCTCCCGGCTGTCCTATCATCCTGCTCTCCGGCATCGACGACACGCGTTTCGTAAGGGAAGCATTGAAGGTCGGCGTAAAGGGATTCGTCCAGAAAAGCCAGGGAGCCGACGACTTAGTTCATGCGATTGAAGAGGTTCGGGGTGGCCGGCTCTACGTCAGCCCCGGAGCCTCCCAGGCTATCGTAGACGCCTGCGCTACGCCAGACGATCAAGGCGGCCCGGGCTCTCATCTCACCCCGAGGGAACGCCAGGTACTGCAGCTCGTCGGAGAAGGGAAATCGACCAAGCAAATCGCCGAAGTTTTGCATATTAGCGTGAAAACCGCGGAATTCCACCGTGGCCGCCTGATGAAGAAGCTCAACGTTCACGACACGGCGAACCTCGTCCGCTACGCGATCCGCGAGGGCTGGATCGCCCCCTAA
PROTEIN sequence
Length: 213
MPVRVVLADDHLVLRQALKALLEHRGLEVVADEADGRAAVDAVQRHAPDVAVLDVAMPVLNGVDAAREIARIAPGCPIILLSGIDDTRFVREALKVGVKGFVQKSQGADDLVHAIEEVRGGRLYVSPGASQAIVDACATPDDQGGPGSHLTPRERQVLQLVGEGKSTKQIAEVLHISVKTAEFHRGRLMKKLNVHDTANLVRYAIREGWIAP*