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13_1_40cm_4_scaffold_17389_5

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: 3988..4539

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 167.0
  • Bit_score: 181
  • Evalue 9.70e-43
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 171.0
  • Bit_score: 248
  • Evalue 9.00e-63
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 167.0
  • Bit_score: 181
  • Evalue 2.70e-43

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 552
ATGCCTCGACAGGTGCTTGAGGACACCCTGACTGCTGACTCCATAGCGGCCGACACGGCCCTCGCGGCGAGCGGGGACCCCAGTGCGTTCGAGCGCCTGTACCGCAGCCATGTGGCGCGGGTCCATACACTAGTACGCCGCATGCTGGACGCGGATGAGGCCGATGATGTCACGCAGGACGTCTTCATCCGGGCATGGCAAAAGCTGTCGACGTTTCGTGGGGAGTCCGCATTTGGCACGTGGCTGCACCGGCTCGCTGTGAACGTGGTACTGGCGCGTCGCAAGAGGGTCGGCGTGGAACGCGGCCGCTTCCTCACAGAGGATGGACCGCTGGATGGCGTGACCGGCCGGCGTGAAACGCCGGAGTTGTCCCTCGACTTCGAGGAAGCGCTCGCCCGCCTTCCCGCGGGCGCCAGGCAGGTGTTCGTGTTGCACGACGTGGAGGGGTATCGCCACGACGAAATCGCGCGCATGCTCGGGGTGGTACCGGGCACGTCGAAATCGCAGCTGCATCATGCGCGGATGGCGCTGCGGAGGCACTTGGACCGATGA
PROTEIN sequence
Length: 184
MPRQVLEDTLTADSIAADTALAASGDPSAFERLYRSHVARVHTLVRRMLDADEADDVTQDVFIRAWQKLSTFRGESAFGTWLHRLAVNVVLARRKRVGVERGRFLTEDGPLDGVTGRRETPELSLDFEEALARLPAGARQVFVLHDVEGYRHDEIARMLGVVPGTSKSQLHHARMALRRHLDR*