ggKbase home page

13_1_40cm_4_scaffold_17882_4

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: 4335..4568

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 77.0
  • Bit_score: 134
  • Evalue 4.40e-29
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 77.0
  • Bit_score: 139
  • Evalue 1.90e-30
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 77.0
  • Bit_score: 134
  • Evalue 1.20e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 234
ATGGACCGCTTCCTGTCCGACGAGATCGAGCAGGCGCTCAACACGCTGCAGCGTCGCGACGCGAAGGTGCTGCGCCTCTACTTCGGTCTCGACGGTGGACGCGAGCACACGCTCGAAGAGATCGGCGGGATGCTCGGCGTCACGCGTGAGCGCGTTCGCCAGCTGCGCGATCGCGCACTCAAGCGACTGCGCGATGGCGACGTCGGCAAGGCTCTAGCGAGCTTCGCCGCCTGA
PROTEIN sequence
Length: 78
MDRFLSDEIEQALNTLQRRDAKVLRLYFGLDGGREHTLEEIGGMLGVTRERVRQLRDRALKRLRDGDVGKALASFAA*