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13_1_40cm_4_scaffold_1812_17

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: 16743..17303

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA74_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 177.0
  • Bit_score: 151
  • Evalue 1.10e-33
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 176.0
  • Bit_score: 218
  • Evalue 2.00e-54
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 176.0
  • Bit_score: 218
  • Evalue 1.00e-53

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGGGTATTCGCAAGGTGGAGGTGAGCGACGCAGAGCTGGTGCGCCGGGTTCGCGGCGGCGACATCGCTGCGTACGGTGCTCTGGTCGCGCGCTATCGCGATCGCCTCGGCCGCTACGCCGTGCACATGATTGGCGACCGGGAGGACGCGGAAGAAGCACTGCAAGACGCATTCGTACGGGCATACCGATCGCTCGCGCGGTGCGACGACCCCGGCCGGTTCGGGGCGTGGTTGTACGGCATCCTCGTAAACCGCTGTCGGACGGTGGGCGCTCGAGCATCGCGACGGCGCCGACTCTTCGTTCGCAACACAGAGAGCGCTCCGGACGCGTCGGCCGATGCCGATTTGGTAGACCGGTTGGGGTGGGACGACGCGGTAAATCGCGCCCTCGCGCGGCTCGCGCCGGAGAACCGAGAGGCGTTTCTGCTCAAGCACGTCGAGGACCTCGAATACGAGGAGATCGCGCGAGTCACTGGGGCGGGGATTTCGGCCTTGAAGATGCGAGTCAAGCGCGCCCGTGAACAACTGCAGCGATTCCTGAAAGAGGCGGAGTATGTTTGA
PROTEIN sequence
Length: 187
MGIRKVEVSDAELVRRVRGGDIAAYGALVARYRDRLGRYAVHMIGDREDAEEALQDAFVRAYRSLARCDDPGRFGAWLYGILVNRCRTVGARASRRRRLFVRNTESAPDASADADLVDRLGWDDAVNRALARLAPENREAFLLKHVEDLEYEEIARVTGAGISALKMRVKRAREQLQRFLKEAEYV*