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13_1_40cm_4_scaffold_1992_8

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(5882..6391)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 166.0
  • Bit_score: 134
  • Evalue 1.30e-28
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 157.0
  • Bit_score: 176
  • Evalue 3.10e-41
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 164.0
  • Bit_score: 144
  • Evalue 2.00e-32

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 510
GTGCCTGAAGACATCGCTGAGGTGTACCGCAGCACCTACGGCGCGCTCGTGCGGTTCCTGTACCGCAAGGTCTGGGATGCCGAGCGCGCCGAGGATCTCGCGCAAGAGGCATTCGCCCGGGCGCTTGTGCACCGACCCGAAAAGGCGCGGGGGTGGTTGTTCGTCGTGGCAGCCAACATGGCGCGCGATGAAGCGCGCCGCGCGGCACGCGAAAAGCGGCACCTCACCCTACTGAAGAGCGAGTCGGATTTCGTGCACGGCTCGCCTGAAGAAGCGATCGATGCCGATACCCAGCGCACTCACGTACGCGCGGCACTCGAGCAGCTGACGCCGCGTGACCGCGAAGCGTTGCTGTTGTGGGACTCGGGGCTATCCTACGATGAAATCGCCGCGCAAACAGGGTTAGCGCGCGGCGCGGTCGGAACCACATTGGCGCGGGCGCGCCGGAGGCTCGTCGAAGCGTATGACGCAGGACTCGCGGGAGGAGGGCAGCATGTCGCACGTGGATGA
PROTEIN sequence
Length: 170
VPEDIAEVYRSTYGALVRFLYRKVWDAERAEDLAQEAFARALVHRPEKARGWLFVVAANMARDEARRAAREKRHLTLLKSESDFVHGSPEEAIDADTQRTHVRAALEQLTPRDREALLLWDSGLSYDEIAAQTGLARGAVGTTLARARRRLVEAYDAGLAGGGQHVARG*