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13_1_40cm_4_scaffold_2680_5

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(4796..6418)

Top 3 Functional Annotations

Value Algorithm Source
LmbE family protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DHJ6_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 223.0
  • Bit_score: 185
  • Evalue 2.00e-43
LmbE-like protein similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 223.0
  • Bit_score: 185
  • Evalue 5.60e-44
LmbE family protein {ECO:0000313|EMBL:ABN53425.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 223.0
  • Bit_score: 185
  • Evalue 2.80e-43

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Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1623
ATGTCGACCGCGCAAGCGTCCCTCGACGAACGCTCGGGTCAATCCTTCGTCTACCTGAGCGGCGGCCACAGGGGGCAGGACGTGCTCCGGCACATCCTTGCCCGCGGCGCCTGGAGACCCGGCTTGATCGCCGTGGTCTCGGATGCTCCTCGAGCAGCCCCGCTCGGCACGGCTACCGAGTACGATGGCATACCCGTCGTCACGGTTCCGAGCGTGTACAGCCCGGCCGCTTGGTGGGCCATGGCCGCCAATGGGATCAAAGGCGTGCTGGCCGTGGGGGTCCCCCCCAATCTCCCCGAGGAATCGTTCCTGAAAGCATTCCCACTGGGGGTGTATGGTTTCCACGCGGGATTGCTCCCCGGCGCCGTCGGTCCGGCCGCCTTGAACTGGGCCCTCATTCGGGGGCTAACCAACACGGGCACCACCTTGCTGCGGTACACGCCTGAGGGCGACGGGTGGTTGCTCGTTTCCCAGCAGCCGTGCTGCATCGAGGATAGGGAGACCGCAGGCACCCTCTGCACGAAGCTTTCGGCCGCCTCTGCGGAATTGTGGGCTCAGCACTGGCCCGCGATCGCGCGAGACGACGTAGCGCTGCGCCCCGCCGGAAAGTTGATCCGCGGTCTCCGCAGAAGACCAGACGACGGCGCGATTCGCTGGGCAGAGCACTCAGCGGCCTCCTTGGACTGCTGGATCCGGGCGCTGGCGCGGCCCTACCCGGGAGCGTTCTTCTGGTTTGGCAGCCGGCACATTTGGGTGCATGGGGTCGAGTGCGACATCCGGCAGAACGCCGGCATCGACGCACCCACATTGACGTCGGTTTCGGCTCGGTGCCTGACGCTCGACTTCCCGGACGGCAGGGTACGGATCTCCGACCTGTGTCTCGATGACGGTTCAGAGATACCCGGTCACCTCTTGGCCGCGCTGGCGGAGCGCGTCGGTGATCGATTGTCGTCCCTGCACACCGGGCAGAGAGTTCTGGTGGTGGCCGCGCATCCCGATGACGAGGTGCTCGGGGTTGGAGGCACCTTGATCCGTCATTTCAAGAGCGGGGACGAGGTCCGCGCAGTCATCGTCTGTACGGCGCACTCGATTCGCTATCGCGAAGGCGAACACGACCAGCCGGGTGACACCCAGCGCGCATCCCACTACCTGGGAGCGCGGTCGACCGGACTGGGGTTCGCCGATCAGCGCTTGGATCAGGGCAGCAACCTGGAGTTGATTCAAGCACTCGAGAGGCAGATTCGGGAGTTCCAACCGCAGGTCATCTACACCCATTGGTGGGGAGACGTGAACGCGGACCATGCACGCATCGCGGAGGCGGTCGATGTGGCGGCCCGCCCCTATTCGGCCCCGGGCCTCCAATCGATCTACGCATTCGAGACCCCCTCCAGCACTGAATGGACCGCGAGTGCTCGGGCGGGAGCGTTTGCTCCCAATGTTTTCGTGGATATCTCGGAGGAGCTGGATCGCAAGTTGGACGCGATGCGATGCTACGAGAGCGAACTCCGCCCACCCCCGCATCCCCGGTCCCTTCGGTCGTTGCAGCAGCGCGCCGCATACTGGGGGAGCGTCGCCAACATGCCGGCGGCCGAGGCACTCGCGCTCCTGCGAACGCGCCGGTGA
PROTEIN sequence
Length: 541
MSTAQASLDERSGQSFVYLSGGHRGQDVLRHILARGAWRPGLIAVVSDAPRAAPLGTATEYDGIPVVTVPSVYSPAAWWAMAANGIKGVLAVGVPPNLPEESFLKAFPLGVYGFHAGLLPGAVGPAALNWALIRGLTNTGTTLLRYTPEGDGWLLVSQQPCCIEDRETAGTLCTKLSAASAELWAQHWPAIARDDVALRPAGKLIRGLRRRPDDGAIRWAEHSAASLDCWIRALARPYPGAFFWFGSRHIWVHGVECDIRQNAGIDAPTLTSVSARCLTLDFPDGRVRISDLCLDDGSEIPGHLLAALAERVGDRLSSLHTGQRVLVVAAHPDDEVLGVGGTLIRHFKSGDEVRAVIVCTAHSIRYREGEHDQPGDTQRASHYLGARSTGLGFADQRLDQGSNLELIQALERQIREFQPQVIYTHWWGDVNADHARIAEAVDVAARPYSAPGLQSIYAFETPSSTEWTASARAGAFAPNVFVDISEELDRKLDAMRCYESELRPPPHPRSLRSLQQRAAYWGSVANMPAAEALALLRTRR*