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13_1_40cm_4_scaffold_4964_4

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(4136..4660)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UX09_ROSS1 similarity UNIREF
DB: UNIREF100
  • Identity: 35.2
  • Coverage: 176.0
  • Bit_score: 101
  • Evalue 7.10e-19
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 159.0
  • Bit_score: 161
  • Evalue 1.60e-37
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG88709.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 159.0
  • Bit_score: 161
  • Evalue 8.10e-37

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 525
ATGAGCATGACCATACCAGCTGTGAGACCGTCGAGCCTCCCGCGTGTGGATGCCCAGGCTCTGGGCACGTTGTACGACACGTACGCACGCCAGCTCTTTCGCCTCGCTTACCGATTGGTCGGAACGCGCGAAGACGCCGAGGATGTCGTGCACGATGTATTCGTCGGGCTACCGGATGCGTTCGCGCATTACGAAGAACGCGGCCGTCTCGATGCCTGGCTGCGGCGGGTCACGGTGCGTGTCGCATTGATGCGCCAGCGCAGTCGCGAACGGCGCCGCGAGATATCCCTCCACAGCGCCGCAGATGTCCCGACTCCGGCAGGGCTTACGCCGGAACAGATCGAGCTGCAGGCGGCAGTGAATGCGCTTCCCGGAGCGCTGCGCACCGTGCTCGTGCTCAAGGAAATGGAAGGTTATAGCCACGCCGAAATCGCGGCGTTGCTCGGCATCAGTGCGGTGACGTCGCGGGTGCGACTCTATCGAGCGATGCGCAGCGTGAGAGAGCGATTGGAGGATCGCCAATGA
PROTEIN sequence
Length: 175
MSMTIPAVRPSSLPRVDAQALGTLYDTYARQLFRLAYRLVGTREDAEDVVHDVFVGLPDAFAHYEERGRLDAWLRRVTVRVALMRQRSRERRREISLHSAADVPTPAGLTPEQIELQAAVNALPGALRTVLVLKEMEGYSHAEIAALLGISAVTSRVRLYRAMRSVRERLEDRQ*