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13_1_40cm_4_scaffold_8215_3

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(651..1712)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 348.0
  • Bit_score: 521
  • Evalue 8.10e-145
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 353.0
  • Bit_score: 435
  • Evalue 7.10e-119
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 354.0
  • Bit_score: 451
  • Evalue 2.70e-124

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1062
GTGATTACGACTCTTGATTTGACAGGGCTGGTCCGGCCGCACTTGGTCGAAATGACCAAGCGCGAGGACAATCCGAACTCCGCCGAGTTCCGGCTGCAGCCGCTCGAGCGGGGCTACGGCTATACGCTGGGCAATTCGCTGCGCCGTCTGCTGCTGTCGTCGCTGCGCGGGGCCGCCGTCTGGGCATTCCGCATCGACGGCGTCGTGCATGAGCATCAGACCATTCCGGGCGTCGTCGAAGACGTCCATCAGATCATTCAGCGCCTGAAGCAGCTCACCCTGGTGCTCGCTCCCGAAGTGGACGAGGCCGTGCTGCGCTTCAAGGTCGAGAAAGCCGGTCCGGTGTACGCGCGTGACCTCGAGCAGCAAGGCTCCGTCACGATCGTGAACCCGGAGCAGCTGCTCTTCACGGTCCAGGACGACCGCGACATTGCGGGCGAGCTGTACGTGAACAAAGGCCGGGGCTACGTCGAGGCCGAGCAGCATCCGGTCGATCGTACGTTGGCGGTCGACGTCGTCCGCGTGGACTCGATCTACAATCCCGTGCGCCGCGCGAATTTCACCGTCGCCGAGACGCGCGTCGGACAGCGCACCGACTACGATCGGCTGACGCTGACCGTCGAGACGAACGGCACGATCTCGCCCGAGGACGCGGTTGCATACGCCGCCGCGCTCGCGCAGGAGCACTTCCGCTTCTTCGTCGACTTCGGCAAGGTGCCGATCGTTGCGGGCGAGCCCGCCGGCAACGGTGGGACCGAGGGCGGTCGGTTGCGCGACGTGTTGAACCGGGCGATCGATGACGCCGGCTTGTCGGTGCGGTCGGTGAATTCACTGAAGAACTCGAACATCCGCACGCTGGGCGACCTCGTCCGTTATAAAGAGGACGATCTGCTCAAGGTCAAGAACGTGGGCGAGAAGGCGCTCGGCGAAATCGCCGAGTTGCTGCGCCGCGAAGGCTTGAACTTCGGCATGCAGTTGGAAGAGGTGCCGGGTGGAGACATCCGCGTGGTCGATCCCGGCAACGCGCCGCAGGCGCAGCTGACGGGCGGCGAGGAAGAGTAG
PROTEIN sequence
Length: 354
VITTLDLTGLVRPHLVEMTKREDNPNSAEFRLQPLERGYGYTLGNSLRRLLLSSLRGAAVWAFRIDGVVHEHQTIPGVVEDVHQIIQRLKQLTLVLAPEVDEAVLRFKVEKAGPVYARDLEQQGSVTIVNPEQLLFTVQDDRDIAGELYVNKGRGYVEAEQHPVDRTLAVDVVRVDSIYNPVRRANFTVAETRVGQRTDYDRLTLTVETNGTISPEDAVAYAAALAQEHFRFFVDFGKVPIVAGEPAGNGGTEGGRLRDVLNRAIDDAGLSVRSVNSLKNSNIRTLGDLVRYKEDDLLKVKNVGEKALGEIAELLRREGLNFGMQLEEVPGGDIRVVDPGNAPQAQLTGGEEE*