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13_1_40cm_4_scaffold_10829_6

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: comp(4313..5107)

Top 3 Functional Annotations

Value Algorithm Source
anti-sigma factor n=1 Tax=Pseudomonas RepID=UPI0003825D47 similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 265.0
  • Bit_score: 136
  • Evalue 3.00e-29
Anti-sigma factor {ECO:0000313|EMBL:KDD65138.1}; TaxID=1419583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mandelii PD similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 266.0
  • Bit_score: 137
  • Evalue 2.50e-29
transmembrane transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 271.0
  • Bit_score: 136
  • Evalue 1.40e-29

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Taxonomy

Pseudomonas mandelii → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGGACTGCGAGGACGTCAGGACCTACTTGCTCGACGACCACCGGGGGCAGCTCGCCCCGGAGCTCGCGCGCGAAGTCCGGGCCCACGTCGAGCGGTGCGCCGCGTGCGCCCACGACGACGCCGCCGAGCAGGCGCTGAGCGAGCTCCTCGAGCGCCGCCTGCCGCAGCATCCCGCGCCCCTCGCGCTCAAGCGCCGGCTCGCGGCGCAGTGGCCGGCGCCCGGCGCGGCGCCCGCGCCCTGGTGGCCCCGGTGGCGCCGCGCCGTGGCGCCGGCGCTCGCCGCCGCGCTCGTGCTCGCCGTTGCCGCGCCGTGGCTGACCGGGCGCCTTCCCGCTTCCGGTCGGGGCGACGGCGCCCAGGCGCTCGTCGCCGAGGCCGTCAACGATCACCTGCGGGTGCTCCTGAGCGAGCACCCGCTCGAGGTCGAGAGCGGCGGCATCCATCAGGTCAAGCCCTGGTTCGCGGGCCGGCTCGACTTCGCGCCCGTCGTTCCGTTCGGCGGCGACGTCGAGTTCCCGCTGAAGGGCGGGGCGGTCGGCTGGTTCGTGGACCGCAAGGCGGCGGTCCTCGTCTACCAGCGGCGCCTCCACCCGATCTCGCTCTTCGTGTTCCGCGCCGACGGGCTGCCGTGGCCCGCGCGCGGCGGGGAGCGGATCGGCGGCGTGGACGCCTACCGGCAGACGGCGCGGGGGTTCACGGTCGTCCTCTGGCGCACGGGCGATCTCGGCTACGCCCTCGTGTCCGACCTGGACCCGAAGGAGCTCGCCACGTTCGCGTCGAAGCTCGTCGGCTGA
PROTEIN sequence
Length: 265
MDCEDVRTYLLDDHRGQLAPELAREVRAHVERCAACAHDDAAEQALSELLERRLPQHPAPLALKRRLAAQWPAPGAAPAPWWPRWRRAVAPALAAALVLAVAAPWLTGRLPASGRGDGAQALVAEAVNDHLRVLLSEHPLEVESGGIHQVKPWFAGRLDFAPVVPFGGDVEFPLKGGAVGWFVDRKAAVLVYQRRLHPISLFVFRADGLPWPARGGERIGGVDAYRQTARGFTVVLWRTGDLGYALVSDLDPKELATFASKLVG*