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13_1_40cm_4_scaffold_12744_11

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: comp(9541..10068)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 169.0
  • Bit_score: 230
  • Evalue 1.40e-57
RNA polymerase, sigma-24 subunit, ECF subfamily id=4554990 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 178.0
  • Bit_score: 229
  • Evalue 3.00e-57
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 156.0
  • Bit_score: 115
  • Evalue 1.80e-23

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGGACGCAGAAGGCTTCGATACCCTGGTGGCGACGCACCACCGGGAGATCTATCGCTACCTCGTCCGGGCTACGTTCCGGGCCAGCGAGGCGGACGATCTCGCCCAGGAGACCTTCCTCCGCGCCTACCGCGCCCACCGGGCGCTCCCCCCCGACGCGAACGCACGCGCCTGGCTGTTCGCCATCGCGAGCAACGTCGCGAAGAACCACTTCCGCGCCGAGTCCCGTCGCCGCCGGGCTCACACCGGGGTGAGGGAGATCCGCATCGAGACCGACGGGGCGGGACCCGAGGGCGAGACGCTGTTCAAAGAGGCCCGGACCGTGCTCGACACCGTCGTCGCCGGATTGCCGCTCAAGCAGCGCCTCGCGTTCACCCTTCGGAAGGTCCACGACCTCGACTACGACGCCATCGGCCGGAGCCTCGACTGCTCGCCGGACAGCGCGCGGGCCCACGTGTTCCAGGCCCTCCGCAAGATCCGTCGGAGCCTGAACGGGTACGAGCTGCCGGTGGGGAGAGACGAGCGATGA
PROTEIN sequence
Length: 176
MDAEGFDTLVATHHREIYRYLVRATFRASEADDLAQETFLRAYRAHRALPPDANARAWLFAIASNVAKNHFRAESRRRRAHTGVREIRIETDGAGPEGETLFKEARTVLDTVVAGLPLKQRLAFTLRKVHDLDYDAIGRSLDCSPDSARAHVFQALRKIRRSLNGYELPVGRDER*