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13_1_40cm_4_scaffold_158324_2

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: comp(389..1330)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 304.0
  • Bit_score: 505
  • Evalue 5.30e-140
LysR family transcriptional regulator id=3087830 bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 294.0
  • Bit_score: 455
  • Evalue 3.50e-125
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 282.0
  • Bit_score: 221
  • Evalue 3.10e-55

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGGAAATCCCGCAGGTCGAGGCGTTCCTCGCGGTCGGCACCTTCGGCGGCTTCCGCCGCGCGGCGGACGCCCTCCGCATCACCCAGCCGGCGGTGAGCGCGCGGATCCGGGCGCTCGAGGATTCCCTGAACGTGCGGCTCTTCGAGCGCGGCAAGCACGGCCTCGCCCTCTCCGCCGCGGGCCGCGCCCTCCGGCCCCATGCCGAGCAGCTCCTCCGCGCCGTCGCGCTGGCCCGCCAGGCGGTCCACGACCTCCGACCGGCGTCGGGCGGCGCGCTCCAGATCGCCGCGGTGCTCTCGATCTGCACGTACCTCCTCCCCGACGTGCTCAAGCGTTTCCAGGCCGCGTACCCCAAGGTGCTCATCACCGTCCGGTCGGGCCACTCCAAGGAGGTCCTCGAGATGGTGCTGCGCGCCGAAGCGGAGATCGGGCTCGCGCGCTCCCTCCACCACCCCGAAGTCGAGACGGTCTCCCTCCGGGACGACCCGCTCATCCTGGTGGCACGCCCGGCCGCCTGGCCGGGACGAGAGCGGCGCGCGCGCCTCGAGGAGGTGGCGGATCGACCGCTCGTCTTCTTCGACCGGGGCTCGAGCGACTGGACGCTCACGCATGGCCTCTTCCGCCGGGCCGGGCTCGTCCCCAACGTGGCGCTGGAGGTCGAGACGATCGAGACCGCGAAGAGGATGGTCGAGCGCGGCGTGGGCTTCGCGTTCCTCCCCCACCTCGCCGTCGGGCGGGAGCTCCGCCGGCGCACCCTCGCCGCGATCGAGATCGTAGACGCCGAGCCCATCAGCCGGAGTCTCGACGTGATCCACCCGCGCGCGCGGCCGCTCTCCGGCGAGGCGCGAGCACTCTTGGGCGTGCTGCGGTCGGCGCTCGCGCAGACCGGAGGACGGGTGAACGTCAGACGACGCGCACGCGCGGGCGCGGGTCGAGCCTGA
PROTEIN sequence
Length: 314
MEIPQVEAFLAVGTFGGFRRAADALRITQPAVSARIRALEDSLNVRLFERGKHGLALSAAGRALRPHAEQLLRAVALARQAVHDLRPASGGALQIAAVLSICTYLLPDVLKRFQAAYPKVLITVRSGHSKEVLEMVLRAEAEIGLARSLHHPEVETVSLRDDPLILVARPAAWPGRERRARLEEVADRPLVFFDRGSSDWTLTHGLFRRAGLVPNVALEVETIETAKRMVERGVGFAFLPHLAVGRELRRRTLAAIEIVDAEPISRSLDVIHPRARPLSGEARALLGVLRSALAQTGGRVNVRRRARAGAGRA*