ggKbase home page

13_1_40cm_4_scaffold_16335_5

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: comp(3483..4268)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 264.0
  • Bit_score: 464
  • Evalue 8.70e-128
ABC transporter-related protein id=3348592 bin=GWF2_Methylomirabilis_70_14 species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 262.0
  • Bit_score: 442
  • Evalue 2.50e-121
ABC transporter releated protein similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 252.0
  • Bit_score: 271
  • Evalue 2.20e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGAGCCCGGCGGGTGTCGGCGGGGCACGCGTTCGGATCGAGGGTGTCCACAAGGCGTTCGCCCTGGACGGCCGCTCGACGCCCGCGCTGGTCGACATCAACCTCGAGGTCCAGGCGGGCGAGCTCCTGTGCCTGCTCGGTCCGTCCGGTTGTGGGAAGTCCACGCTGCTCAACATCGTCGCGGGCTTTCTGCCGCCGACGCGCGGGCGGGTGCTGGTGGACGCCACGCCGATCACGGGCCCCGGGCCCGAGCGCGGTGTGGTCTTCCAGGAGTACGTGCTCTTTCCCTGGCTCACCGTGGCCCAGAACGTCGAGTTCGGGCCACGCCTCGCTGGGGTGGAGGCCGCGCGGTGTCGAGAGATCGCGGCGCGATACCTGGACATGGTCGGGCTCCGCGAGCACGCGACGAAGTTCCCCGTGCAGCTCTCCGGCGGGATGAAGCAGCGCGTGGCGATCGCGCGGGCACTCGCCAACAACCCGTCCATCGTGCTCATGGACGAGCCGTTCGGCGCCCTCGATGCGCAGACTCGCGAGGTGATGCAGGAGGAGCTCTCGCGCATCCAGCGGGTCGAGCACAAGACGATCGTCTTCGTCACGCACTCGATCCGCGAGGCGGTGTACCTGGCGGATCGACTGGTCGTGCTGACCTCGGCGCCCGGGCGGATCAAGGAGATGTTCACGATCAAGCTCGGGGAGGCGCGGGACCGGTTCGCCCCGGAGTTCACCCGCTACGAGAGCGAGATCACGCGCGTCGTGAAGGAAGAAGTCGCGAAGGTGCGCGAATGA
PROTEIN sequence
Length: 262
MSPAGVGGARVRIEGVHKAFALDGRSTPALVDINLEVQAGELLCLLGPSGCGKSTLLNIVAGFLPPTRGRVLVDATPITGPGPERGVVFQEYVLFPWLTVAQNVEFGPRLAGVEAARCREIAARYLDMVGLREHATKFPVQLSGGMKQRVAIARALANNPSIVLMDEPFGALDAQTREVMQEELSRIQRVEHKTIVFVTHSIREAVYLADRLVVLTSAPGRIKEMFTIKLGEARDRFAPEFTRYESEITRVVKEEVAKVRE*