ggKbase home page

13_1_40cm_4_scaffold_18844_3

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: 2181..3266

Top 3 Functional Annotations

Value Algorithm Source
leuB; 3-isopropylmalate dehydrogenase (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) (EC:1.1.1.85) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 361.0
  • Bit_score: 638
  • Evalue 8.00e-180
3-isopropylmalate dehydrogenase id=4703436 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 360.0
  • Bit_score: 633
  • Evalue 1.40e-178
3-isopropylmalate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 353.0
  • Bit_score: 441
  • Evalue 1.70e-121

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGGCCACGTACCGGATCGCGGTCCTGCCCGGCGACGGCATCGGGCAAGAGGTCACCCCCGAGGCTGTGCGGGTCCTCAAGGCGGTCGGCAAGGGGGCGGGTGTCGGATTCGAGTTCGAGCAGGCGCTGGTCGGCGGCGCCGCGATCGATGCGACGGGGCACCCGCTGGCTCCCGGGACGCTCGACCTGTGCCGGCGGTCCCACGCGATCCTCTTCGGCGCCGTCGGCGGCCCCAAGTGGGACACCGTCGCGCACGAGCGGCGGCCCGAGCGCGGGCTCCTCGCCCTGCGTAAGGAGCTGGACCTCTACGCCAACCTGCGGCCGGCGAAGTGCTTCCCGATGCTCGTGGACGCCTCCCCGCTCAAGCGGTCGGTCGTCGAGGGGACGGACCTCATGGTGATCCGCGAGCTCACGGGTGGCCTCTACTTCGGGGAGCCCCGGGGGGTGGAGCGGCTCGCCGACGGCGGGGCGCGGGCGGTCAACACGATGGTCTACACCTCGCGCGAGATCGAGCGGATCGCCCGGACCGCCTTCGAGGTGGCGCGCAAGCGCCGGAAGCGCCTCGCCTCGGTGGACAAGGCCAACGTCCTCGTCGTCTCCCAGCTCTGGCGCGAGGTCGTGACGCGCGTCGCCAGGGACTACCCCGACGTCACGCTCGAGCACGTCCTCGTCGACAACTGCGCGATGGCGCTCGTCCACCGGCCGTCCCGGTTCGACACGATCGTGACCGAGAACACCTTCGGTGATATTTTGTCGGATGAGGCCGCGATCCTCGCGGGCTCGATGGGAATGCTGCCGTCGGCGTCCCTTGGCGGGTCGGTGGCGCTCTACGAGCCGGTGCACGGCACGGCGCCGGATATCGCCGGCAAGGGGATCGCGAACCCGATCGCCGCGATCCTCTCGACCGCGATGCTGCTCCGCTACACGCTCAGTCTGGAGAAGGACGCCGATCGGGTCGAGCGCGCCGTGCTGCGGGTGCTCGAGCAGGGCCACCGCACGGCCGACATCGCGGCGCCGGGCGCGCGGACCGTGGGCACGAAGGAGATGGCGGACCTGATCGTGCGGGACGTGGAGGACCAGTACTGA
PROTEIN sequence
Length: 362
MATYRIAVLPGDGIGQEVTPEAVRVLKAVGKGAGVGFEFEQALVGGAAIDATGHPLAPGTLDLCRRSHAILFGAVGGPKWDTVAHERRPERGLLALRKELDLYANLRPAKCFPMLVDASPLKRSVVEGTDLMVIRELTGGLYFGEPRGVERLADGGARAVNTMVYTSREIERIARTAFEVARKRRKRLASVDKANVLVVSQLWREVVTRVARDYPDVTLEHVLVDNCAMALVHRPSRFDTIVTENTFGDILSDEAAILAGSMGMLPSASLGGSVALYEPVHGTAPDIAGKGIANPIAAILSTAMLLRYTLSLEKDADRVERAVLRVLEQGHRTADIAAPGARTVGTKEMADLIVRDVEDQY*