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13_1_40cm_4_scaffold_25392_3

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: comp(2534..3556)

Top 3 Functional Annotations

Value Algorithm Source
rpoE1; RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 334.0
  • Bit_score: 522
  • Evalue 3.50e-145
RNA polymerase sigma-E factor id=1709623 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 337.0
  • Bit_score: 515
  • Evalue 3.10e-143
rpoE1; RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 189.0
  • Bit_score: 153
  • Evalue 1.10e-34

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1023
GTGCCGGGTCTCGACGATCTCGCCCTGGTCGAGCGTTGCATCGCCGGCGACGTCACCGCGTTCGAGCCCCTGGTCGAAAAATATCGGGCGCGCGTCTACCGCCTCGCGTTCAACGTCCTGCGCGACACGGAGGACGCGTGGGACGTCGCCCAGGAGGTGTTCATCCGCGCCTGGCAGGCGCTCCCGTCGTTCCGGCGACAGTCGGCCTTCTACACCTGGCTGTTCCGGATCACCATGAACGTGGCGTCCGACCGCGCCCGCCAGCGCTCCGCGCGCGGGCGGGCGTTCGGGACCGAGCGCGTCGAGGAGGAGGAGTGGGAGCGCGAGCTGATCGACCCAGGGGAGCCGCCCGACGCGCGCGCGGCGCGCGGCGAGGCGCGGCGGCGGATCGCGCGCGCGCTCGACGCTTTGCCGGAGCATCACCGCGCGATTATCATGTTGAGTGATCTCGAGGGCCTCTCGTACCGAGAGATCGCAGAGGTGCTGAGGATCCCGATGGGAACCGTCATGTCGCGTCTGCACCACGCGCGCAAGCGCCTGCGCGCGGTGCTCGGCCCGCTGCTCGGTGTGGTCCTCGCCCTCCTGATCCTCCTCGCGCCGACACCTGCCCCGGCGCAGCAGGTCGTGAGCTTCGGTACCCGCGTCGTGCTCGCCGGCGACGCGCCGCCGCCGCCCGGCATGCGGCTCGCGCCGGCGGGGCCCGACGAGCGTCTGGACAGCTTCCTCCCGAAGCTCCGGCAGCACTTCCGCTACAAGGAGTACACCTCCCTGGAGCGCTACCGGGCCGAGGTGCCCATCGGCGCCACCCAGCGCTGGCCCGTGCCCGGCGACCGCCAGCTCGAGGTCACGCCGGAGAGCGTGCGGGGAGGCACCGTGAAGTTCAAGGTGCGCCTCACCCGCGGTAACCTCACCGAGGTGGGGACCAACATCGAGGCGCAGTCGGGCAACCCCGCGGTCATCGGCGGTCCGCGCCACGGCGCCGGCGTCTTGATCATCATCGTCTGGCCGAACCCGAATCCCTGA
PROTEIN sequence
Length: 341
VPGLDDLALVERCIAGDVTAFEPLVEKYRARVYRLAFNVLRDTEDAWDVAQEVFIRAWQALPSFRRQSAFYTWLFRITMNVASDRARQRSARGRAFGTERVEEEEWERELIDPGEPPDARAARGEARRRIARALDALPEHHRAIIMLSDLEGLSYREIAEVLRIPMGTVMSRLHHARKRLRAVLGPLLGVVLALLILLAPTPAPAQQVVSFGTRVVLAGDAPPPPGMRLAPAGPDERLDSFLPKLRQHFRYKEYTSLERYRAEVPIGATQRWPVPGDRQLEVTPESVRGGTVKFKVRLTRGNLTEVGTNIEAQSGNPAVIGGPRHGAGVLIIIVWPNPNP*