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13_1_40cm_4_scaffold_400752_1

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: 3..1892

Top 3 Functional Annotations

Value Algorithm Source
Signal transduction histidine kinase, nitrogen specific, NtrB id=4082171 bin=GWF2_Methylomirabilis_70_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 393.0
  • Bit_score: 397
  • Evalue 2.20e-107
signal transduction histidine kinase, nitrogen specific, NtrB Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 393.0
  • Bit_score: 397
  • Evalue 3.20e-107
two component, sigma54 specific, transcriptional regulator, Fis family similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 222.0
  • Bit_score: 215
  • Evalue 4.50e-53

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1890
GCGCTCTTCGCGGCGGCGGTCGCCGCGGGCGGTCTCGCCGGGCTCGGGGGGCTCGCGCTCGGCGTCGCTTGGAGCCGGCGGATCTGGGCCATCGTCGAGCGGACCGATGCCGCGGTGCCCACCGCCAACGGTTTCCCGGCCCACCGCGTTCCGGACGAACTCGGCGCGCTCGACGCGGCCGTCGGGCGCCTCACGCTCTCGATGGATCGCTTCATCTCGGACAGTGACATCCTCGCACGGCTCCCTGCCGCGATGCTGCTCGTGGACGACGCCCGCCGGCTGCTCGTGTTCAACGTGACGGCGGAGGCCCTGCTGGGACCTGATCTCGCGCGCTTCCGCGGCCGGCCGCTGCTCGGCGTGGACGGCCCGCTGCCGGTTGCGCGCGGCAACGAGCCGCTCGCCGGCGTGATGGGCGAAGCTGAGCGGGCAGGGGCGGCGCTGCACGTCGAAGAGGTGCAGGCGAGCACGTGGTCCGGGACACCTCTCCTCCTCGACGTGACGATCCAGAGCCAACCCGGGCGAGAGCCCAGTGGCGGGTCCGTGCTGCTGCTGCGCGATGCTTCGGAGAAGCGGCGCATCAGGGAGCAGATCAAGCGGGCCGACCAGCTCGCGCTTCTCGGCGGGATGACGGCGCGGATCGCGCACGAGGTGCGAACGCCGCTCGCCTCCCTTCGGGGACTCGTGGAGCTCCTGCAAGCCGACCTCGCGGACCGCGACCGTCCGCAGGAGTACCTCGTCCGCATCCTCCAGGCGGTCGAGCGCCAGGAGCGGCTCGTCGAGAGGCTCCTGAGCTTCACACATCCCGAGCCGGAGAGCTGGCAACCCGTCCTCGTGTACGAACTGCTCGAGGATCTCATCATGGCGTGGCCCGGTCGGCGACCGTCTCTGACGGTGGAGCGGCCGGTCACGCCGGTCAACGGCGACCCGGTGCTTCTCAGCCAGGTCTTCACGAATCTGTTCCAGAATGCGCTGGAGGCGAGTCGCGACCGCGAGGTCGCCGTCCGGGTATCGATGAACGACGGCAGGGTCCGGGTCACGGTCACGAACGAAGGCGCCGGCATCCCGCCCGAGCTGCACGAACGCATCTTCCAGCCGTTCTTCACGACGAAGCCGGGAGGGACCGGGCTCGGGCTCGCGATCGCCCGGCAGGTCGTCGAGGCGCATCACGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCTGACCAGATCCTCGTCGTCGAGGACGATGAGAACCTCGCGTTCGTCCTCTGCGAGGCGATGGGGCGCAAGGGCTACCGGGCCGAGGCCGTCGCCACGATGGCCGCGGTGCGGGAGCGGTTGAAGGCGGCGCCGTACGACCTCGTGCTGCTGGATCTGAAATTGCCGGACGGCGACGGCCTCGAGGCGATCCCGCAGTGCCGGGAGCTCGCCCCCGACACGCCGATCATCGCCATGACGGCCTACGCGGTCAGGCACGCCGCGACGGAGGCGTTGCGCCGCGGGGCGTACGATTTCTTCACCAAGCCGCTGAAGATCGCCGAGCTCGAGATCGTCGTCGGACGGGCCCTCGAGCGCCGCCGCCTCCAGCAGCACATCGCGAGGCTCGAGGCGTCGCGCGCGACCGGCTTCGAGGAGCTGGTCGGCTCGAACCAGGCCTTGGTTCGCGCGCTGGAGGCGGCGCAGCGCGTCGCGCCGACGGACCTCACGGTGTTGATCGAGGGCGAAAGCGGTACGGGTAAGGAGCTCCTGGCGCAAGCGATCCACCGCCGGAGCGCGCGCAAGGACGGCCCCCTGGTCGCCGTGAACTGCGCGGCCATCCCGGAGGGGCTCCTCGAATCCGAGCTGTTCGGCCACGAGCGTGGCGCCTTCACGGGCGCCATCCGCACGCGCGTC
PROTEIN sequence
Length: 630
ALFAAAVAAGGLAGLGGLALGVAWSRRIWAIVERTDAAVPTANGFPAHRVPDELGALDAAVGRLTLSMDRFISDSDILARLPAAMLLVDDARRLLVFNVTAEALLGPDLARFRGRPLLGVDGPLPVARGNEPLAGVMGEAERAGAALHVEEVQASTWSGTPLLLDVTIQSQPGREPSGGSVLLLRDASEKRRIREQIKRADQLALLGGMTARIAHEVRTPLASLRGLVELLQADLADRDRPQEYLVRILQAVERQERLVERLLSFTHPEPESWQPVLVYELLEDLIMAWPGRRPSLTVERPVTPVNGDPVLLSQVFTNLFQNALEASRDREVAVRVSMNDGRVRVTVTNEGAGIPPELHERIFQPFFTTKPGGTGLGLAIARQVVEAHHXXXXXXXXXXXXXXXXPDQILVVEDDENLAFVLCEAMGRKGYRAEAVATMAAVRERLKAAPYDLVLLDLKLPDGDGLEAIPQCRELAPDTPIIAMTAYAVRHAATEALRRGAYDFFTKPLKIAELEIVVGRALERRRLQQHIARLEASRATGFEELVGSNQALVRALEAAQRVAPTDLTVLIEGESGTGKELLAQAIHRRSARKDGPLVAVNCAAIPEGLLESELFGHERGAFTGAIRTRV