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13_1_40cm_4_scaffold_7501_14

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: 11414..11923

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 168.0
  • Bit_score: 298
  • Evalue 5.40e-78
RNA polymerase sigma factor id=4801469 bin=GWC2_Methylomirabilis_70_16 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 166.0
  • Bit_score: 250
  • Evalue 1.20e-63
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 179.0
  • Bit_score: 153
  • Evalue 5.60e-35

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 510
GTGCCCCAAAGCGAGTTCGAGCGGCTGGCCCTCGAGCACATCGACGCCCTCTACAACTTCGCGGTGTACCTGACGCGCAACCCACCGGAGGCGGACGACCTCGTCCAGGAAACCTACCTCCGGGCGTTCCGCTTCGCCGACCGGTTCACGCCCGGAACCCATCTCCGCGCCTGGTTGTTTCAAATCTTGAGGAACACGTTCCTGACCTTCTATCGGGTCCGCGAGCGCGAGTCCGCCATCGCGGACGACGGCGTGCCGGACTGGGACGTGCCCATGTTTCACGACGCGCCCGAGGACTCGTCGAGCGTCATGGAGGCGCACACGGACCTCGAGCGCGCGCTGCGCCGCCTGCCAGAGGAATTCCGGACCGTCCTCTTGCTCGCAGAAGTCGAGGGCATGCCGCTCGAGGAAGTCGCGCGCGTGATGGAGTGTCCCGTCGGCACCGTCAAGTCGAGGATCTTCAGGGCGAAGGAGCGGTTGCGCGCGCTGCTGCGCGACTACAAGCGGTGA
PROTEIN sequence
Length: 170
VPQSEFERLALEHIDALYNFAVYLTRNPPEADDLVQETYLRAFRFADRFTPGTHLRAWLFQILRNTFLTFYRVRERESAIADDGVPDWDVPMFHDAPEDSSSVMEAHTDLERALRRLPEEFRTVLLLAEVEGMPLEEVARVMECPVGTVKSRIFRAKERLRALLRDYKR*