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13_1_40cm_4_scaffold_10936_6

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: 6266..6853

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 181.0
  • Bit_score: 139
  • Evalue 2.60e-30
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 180.0
  • Bit_score: 220
  • Evalue 2.10e-54
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 185.0
  • Bit_score: 150
  • Evalue 5.50e-34

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 588
ATGAAGCCTGATTCCCAACCCCCGGACCCCGCTGCGCGTATACCCGAGCAGGACGAAGCCGCCCTCGTCGCTCGTGTCCGGGCTGGGGATCGGACCGCCTTCGGCGTCCTGGCGGAGCGATACGCGGGCGTAGCGCGACGGGTGGCGCGGGCCGTGCTGGGAGACCCCGACGACGCCGACGACGCGGCACAGGACGCGCTGCTGTCGGCCCTCGTGAAGCTCGACCAGTACGATCCCCGCCGACCGTTCGGGCCGTGGCTCCTGCGCATCGTAGCGAACGCGGCGACCGACCGGCGGCGGCGACGCAAGGTGCGCCGGGCCGAGTCGCTCGATCCCGCGCTGGTGGCGGGCGGCACGCGTCCCGACGCCGCTGCCGAGCAACGCGCCCTGGCCGAGCGGCTGCGGGGAGCGCTCGCCGAGCTGTCGGAGCGGCGCCGCCTGGCGGTCGTGCTGTTCGACGTGGAAGGCTACTCACACGCCGAGATCGCCCGGATCCTGGGGATCCCCGAGGGGACCGTGCGCTCGGAGGTGTTCCACGCGCGCCGTCGGTTGCGCGTGTTGCTGGCGGACTGGAAGGAGGACGGATGA
PROTEIN sequence
Length: 196
MKPDSQPPDPAARIPEQDEAALVARVRAGDRTAFGVLAERYAGVARRVARAVLGDPDDADDAAQDALLSALVKLDQYDPRRPFGPWLLRIVANAATDRRRRRKVRRAESLDPALVAGGTRPDAAAEQRALAERLRGALAELSERRRLAVVLFDVEGYSHAEIARILGIPEGTVRSEVFHARRRLRVLLADWKEDG*