ggKbase home page

13_1_40cm_4_scaffold_2289_11

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: comp(11055..11480)

Top 3 Functional Annotations

Value Algorithm Source
pilD; leader peptidase/N-methyltransferase (EC:2.1.1.- 3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68 similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 140.0
  • Bit_score: 180
  • Evalue 1.40e-42
pilD; type IV pilus prepilin peptidase PilD (EC:2.1.1.- 3.4.23.43) similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 136.0
  • Bit_score: 113
  • Evalue 4.10e-23
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8D9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 136.0
  • Bit_score: 113
  • Evalue 1.50e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 426
GTGACCGACGCCCGCCACTACCTGATCCCCGACGAATACAACTGGGCCGGTCTGATCATCGGACTGGGCGCCTCCCTCACGGCGGGCGTGCCGGGGTTCAAGGAAGCAGTGCTCGGGGCGGCGACGGGCTTCGCGCTACTGTACGCGGTCGGCGTCGCCGGGCGGTGGGTCTTCGGGGAAGAGGCGATGGGGGGCGGTGATATCAAGATGATGGCGATGGTGGGCGCGTTCGTCGGCTGGAAGGGCGTGCTGCTGACCGTGTTCGCGGCGTCGGTGTTCGGCAGCCTGGTGTACGTCCCGCTCCTGCTCCGGGGCAAGAAGCGCCACGTCCCGTTCGGGGTATTCCTCGCCATGGGGGCGGCCGTCGTGTTCGTGTTCCGCGACGCCATCATCGACTGGTACCTGCGGTTCCTGCGGGCGGGGTGA
PROTEIN sequence
Length: 142
VTDARHYLIPDEYNWAGLIIGLGASLTAGVPGFKEAVLGAATGFALLYAVGVAGRWVFGEEAMGGGDIKMMAMVGAFVGWKGVLLTVFAASVFGSLVYVPLLLRGKKRHVPFGVFLAMGAAVVFVFRDAIIDWYLRFLRAG*