ggKbase home page

13_1_40cm_4_scaffold_2846_9

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: 9685..11946

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 731.0
  • Bit_score: 990
  • Evalue 1.00e-285
General secretory pathway protein E id=2322390 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 740.0
  • Bit_score: 493
  • Evalue 3.60e-136
general secretory pathway protein E similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 554.0
  • Bit_score: 450
  • Evalue 7.60e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2262
ATGGCCGACACCAACTTCCCCGACGAATGGCTGGCGCGCTCCCTCGAGGGAGTGCTGAGTCCCGAGCTCCTGGTGGAGCTCCGGACGAAGGCGCAGCCCGGCCAGACCCTGTGGGAGGCGCTCGTCGCTCAGAAGGTCGTGAACGACGACCAGATCCTCACCGCCCTCTCGACGCGCTTCCGCCTGAAGCTGGCCGACGTCAAGGACGTGGACCCCGGTATCAAGGAGAAGGTCCCGGAGCAGCTGGCCCGCCGCTATCACGTCCTGCCGCTCCGCATCACCGACTCCTTCCTGGAGGTCGCGACCGCCAACCCGTTCGACCTGGATGCGGAGAAGACCCTGGCGTTCGCCACGGCGCGGGAGATCCGCATGCAGCTGCTCGCGCCGTCGAAAATCAACGAGAAGCTCGACGAGCTGTACCGACCCGAGAAGGCGCTCGACAAGGTGTTCCAGCAGATGGAGGGGTCGACCGACTTGGTCCAGGTGGTCGAGGACAAGGGCCCCGACGAGATCGCCGTCTCCGAGGAGCAGGCGAGCCAGCGGCCGATCGTGCGGCTCGTGGACCTGATCATCTCGGAGGCCATTCTCGCCCGCTCGAGCGACATCCACATCGAGCCGGAAGAAGGCGGCGTGGCGGTGCGCTACCGCATCGACGGTGTACTCCGCCAGCAGATGAAGATCCCGCGCCAGGCCGGGCTGCCGCTCATCTCCCGTATCAAGATCATGTCTTCGCTCGACATCGCCGACCGGCTGCGCCCCCAGGACGGCCGCGCCCGCGTGGCCGTGAACGGCCAGCCGATCGACCTGCGCGTCTCGACGCTCCCCGCGGCCCTGGGCGAGAAGGTCGTGATCCGCATCCTCGACTCCCGCGCGACCGTGAAGACGCTCGACTCGCTGGGGTTGAGCCCGGACGAGGTCGAGCGCATCGGGCGGCTGCTGGAAAACCACGAGGGGATTCTCCTGGTCACCGGGCCCACGGGGTCGGGGAAGACTACCACGCTCTACTCCTGCATCAACCAGATCAAGAGTGAAGGCGTCAACATCGTGACGGTCGAAGATCCGGTCGAGTACCGGATCCAGGGGATCGTCCAGGTGCAGGTGCAGGAGAAGGCCGGGCTGACGTTCGCGTCGGCGCTGCGCTCGATCCTGCGTCAGGATCCCAACGTCGTGCTGGTGGGCGAGATCCGTGACCGCGAGACGGCCCAGATCGCCGTACAGGCGTCGCTCACCGGTCACCTCGTGCTGTCCACGCTGCACACCAACGACGCGGCCAACGCCGTGACGCGCCTCGTGGACATCGGGGTCGAGGCGTACAAGATCGCGGCGGCGTTGCGCGGCGTGGTGGCGCAGCGGCTGATGCGCAAGCTTTGCCTCACGTGCAAGGAAGTCTGGATGGAGGCGCCCCCTGATCGGCTGAAGCGGTGGATTCCCAAAGGGACGCCGCTGTACCGCGCGGCGGGCTGCCCCGACTGTGCGATGACGGGCTATCGGGGCCGGTTTTCGATCATGGAGGTGCTCACGATCACGCCCGAGGTCGAGCGCCGCATCGCCGGGGGCGAGCCCGCGGAGCAGATCGCGACCGCGGCGCGACGCGGCGGCATGAAGTCGCTGTGGGACTCGGGGCTGGCCCACGTGCTGCGCGGCGAGTCCACCGTGGACGAGCTGATGCGCGTGGTCGACGTTCCGCAGGAGGACGAGGTGGAAGCCGCTCCGGCGCCCGCCGGCCGGCGCCCGTCGAGCGGCATGCCGGCGTCGCGCGGCACGCCCGCTCCTCCCCCCGGCACGTTCGCCGCGCCGCCGGCTGCCTCTCCGGCGGAGCCGCTCGCCGCCCATTTCGACTTGCTGGAGGAGCCGCCGAGGGCTCGAGCGTCGGGGCCGCACGGTGAGCTCGCGGTAAAGGTGTTGCTGGTGGACGACGAGGACAGCCTCCGGAAGGTGATGCGCGACCTGCTCGAGCGGGACGGCTACAACGTATCGGAGGCTCGCGACGGCGTACAAGCGCTCGACCAGATCGACCGCGTTGGGCCGGACATCATCGTGCTCGATTTGAACCTGCCCGGGCTCGACGGCTACGGGGTGCTGTCGCACCTGCGCTCGCGCCCCGCCACCGCCTCCATCCCGGTGATCGTGCTCACCGCCAAAGGGGACGAGGACAACGAGGTGCGAGTGTTCGAGCTCGGCGCCGACGACTTCCTGACGAAGCCGTTCCGCGCCCGCGCGCTGTCGGCCCGGCTCGAAGCCGTCCTTGGGCGCCGCCGGTAG
PROTEIN sequence
Length: 754
MADTNFPDEWLARSLEGVLSPELLVELRTKAQPGQTLWEALVAQKVVNDDQILTALSTRFRLKLADVKDVDPGIKEKVPEQLARRYHVLPLRITDSFLEVATANPFDLDAEKTLAFATAREIRMQLLAPSKINEKLDELYRPEKALDKVFQQMEGSTDLVQVVEDKGPDEIAVSEEQASQRPIVRLVDLIISEAILARSSDIHIEPEEGGVAVRYRIDGVLRQQMKIPRQAGLPLISRIKIMSSLDIADRLRPQDGRARVAVNGQPIDLRVSTLPAALGEKVVIRILDSRATVKTLDSLGLSPDEVERIGRLLENHEGILLVTGPTGSGKTTTLYSCINQIKSEGVNIVTVEDPVEYRIQGIVQVQVQEKAGLTFASALRSILRQDPNVVLVGEIRDRETAQIAVQASLTGHLVLSTLHTNDAANAVTRLVDIGVEAYKIAAALRGVVAQRLMRKLCLTCKEVWMEAPPDRLKRWIPKGTPLYRAAGCPDCAMTGYRGRFSIMEVLTITPEVERRIAGGEPAEQIATAARRGGMKSLWDSGLAHVLRGESTVDELMRVVDVPQEDEVEAAPAPAGRRPSSGMPASRGTPAPPPGTFAAPPAASPAEPLAAHFDLLEEPPRARASGPHGELAVKVLLVDDEDSLRKVMRDLLERDGYNVSEARDGVQALDQIDRVGPDIIVLDLNLPGLDGYGVLSHLRSRPATASIPVIVLTAKGDEDNEVRVFELGADDFLTKPFRARALSARLEAVLGRRR*