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13_1_40cm_4_scaffold_4020_1

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: 2..355

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 115.0
  • Bit_score: 178
  • Evalue 3.10e-42
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 117.0
  • Bit_score: 210
  • Evalue 1.30e-51
RNA polymerase sigma-54 factor, RpoN similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 117.0
  • Bit_score: 186
  • Evalue 4.10e-45

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Taxonomy

RBG_16_Acidobacteria_68_9_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 354
GAGTACCTGAAGCCCCTCACCCTGCGCGAGGTCGCGGACGTCATCAACATGCACGAGAGCACGGTGAGCCGCGTGACGAACGAGAAGTACGTGCAGACCCCGCGGGGCCTGCTCCCGCTGAAGTTCTTCTTCTCGAGCGGACTCGCCACCACTACCGGCGAGGACGCCAGCGCCCGCGCCATCAAGGCGCAGATCAAGAAGATGGTGGACGAGGAAGAGCCGAAGAACCCGCTCACCGACCAGCAGATCGTGGAGCTGTTCGGGCAGCGTGGAGTGAAGATCGCGCGCCGTACCGTGGCCAAGTACCGCGACCAGCTCGGCATCTTGCCCGCGCGGATGCGGAAGCGTCTATGA
PROTEIN sequence
Length: 118
EYLKPLTLREVADVINMHESTVSRVTNEKYVQTPRGLLPLKFFFSSGLATTTGEDASARAIKAQIKKMVDEEEPKNPLTDQQIVELFGQRGVKIARRTVAKYRDQLGILPARMRKRL*