ggKbase home page

13_1_40cm_4_scaffold_443_4

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: 2282..2893

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 181.0
  • Bit_score: 188
  • Evalue 7.20e-45
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 179.0
  • Bit_score: 187
  • Evalue 3.20e-45
RNA polymerase sigma factor id=4650330 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 184.0
  • Bit_score: 187
  • Evalue 1.10e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_Ignavibacteria_37_17_curated → Ignavibacteriales → Ignavibacteria → Ignavibacteriae → Bacteria

Sequences

DNA sequence
Length: 612
ATGGGTCACGGTATGGCCTCGACCCCGACTCCTCCCCCGACACCCACTCCTGCCGCCGACGCCGAAAAGCGGGCCAGCTTCGAGCGCGAGGCGCTGGTGCACCTCGATAGCCTGTACCGCGTGGCGCTGCGCCTCACGGGGAACCCCGCTGAAGCCGACGACCTCGTCCAAGAGACGATGCTCAAGGCGTACCGCGCCTGGCACCAGTTCGAGCAGGGCACCAACGCCAAGGGTTGGCTCCTGACCATCCTGCGGCACGCCTTCATTAATGAATACCGGCGCCGTACCCGGCATCCCGAGACGGTGGACTTGGACGCGATCGAGCCATTTTCCGTGTTCGAGGAGCTTCAGGACGAGGACCCCCAGGGCACGTTCTTCGATCGGATCGTGGATGACGAGGTATTGCGGGCGATCGACGCGTTGCCGGAACAATTCCGGGAGACCGTGGTGTTGAGCGACGTGGAGGGTCTCTCCTATGAGGAGATCGCCCGCGTGCTGGAGGTGCCGGTGGGCACCGTGAAGTCGCGGTTATTCCGCGCCCGGCGCATGCTGCAAGCCAAGCTGTACGACTACGCGGTCGGGATGGGATACATCAAGGGAAGCTCGACATGA
PROTEIN sequence
Length: 204
MGHGMASTPTPPPTPTPAADAEKRASFEREALVHLDSLYRVALRLTGNPAEADDLVQETMLKAYRAWHQFEQGTNAKGWLLTILRHAFINEYRRRTRHPETVDLDAIEPFSVFEELQDEDPQGTFFDRIVDDEVLRAIDALPEQFRETVVLSDVEGLSYEEIARVLEVPVGTVKSRLFRARRMLQAKLYDYAVGMGYIKGSST*