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13_1_40cm_4_scaffold_5986_3

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: comp(1592..2377)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 248.0
  • Bit_score: 301
  • Evalue 9.80e-79
tRNA pseudouridine synthase A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 260.0
  • Bit_score: 263
  • Evalue 2.10e-67
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 257.0
  • Bit_score: 265
  • Evalue 1.20e-68

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 786
GTGACGAGCCGGCCCTTCCTCGCCGTGGTCCACTACGACGGGGGCGGCTTCGTCGGGTGGCAGCGGCAGCGGGATGGGCGCACGGTGCAGGCGGATTTCGAGGCCGTGCTGGAGCGCCTCACCGGGCGGCGCACGGCGGCGACGGGTGCCGGTCGTACCGATACGGGCGTGCATGCGCTGGGGCAGGGCGTGGGCTTCCTCGCCGCCGAGCGCTGGGCCCGCGAGCCAGAAGGGCTGCGTCGGGCGCTGAATGCGTTGCTGCCGCGGGACGTGTGGGTCGAGCGGGTCCACTCGATGGAGGCGGGGTTTCACGCGCGCAAGAGCGCCGTGGCGCGCCGCTACCGCTACGTGATCGGGACGGACGATGCGGCGCACTCGCCGTTCCGGCGCCCCTACGAATGGGCGCTCGGGCGCCCGCTGGACCAGGCGTTGCTGGTGGACGCCGCGGCAGCGCTCGTGGGGGAGCACGATTTTCGCGGTCTGGCCGCGGTCGGGCAGGTGAAGCCCCACTACCGCAGCCGCGTGGCGCTCGCCGAGTGGGCGCCGCGGACTGACGGCGCGGGGGTCACGTTCACGATCGAGGCCGACCGGTTCCTGCAGCGCATGGTGCGCTTCCTCGTGGGCGCGATGGTGGACGTCGCCTTGGGCCGGCGCCCCCCATCGGACCTCTCCCGCTTGCTCAGCGCGACGGACAACCAGGCGGCCAGCCCGCCCGCCCCGCCCCAGGGGCTGTATTTGGTGGCGGTGCGCTATCCTGCTGACCTCTACGCCGGGGCCGAGTCATGA
PROTEIN sequence
Length: 262
VTSRPFLAVVHYDGGGFVGWQRQRDGRTVQADFEAVLERLTGRRTAATGAGRTDTGVHALGQGVGFLAAERWAREPEGLRRALNALLPRDVWVERVHSMEAGFHARKSAVARRYRYVIGTDDAAHSPFRRPYEWALGRPLDQALLVDAAAALVGEHDFRGLAAVGQVKPHYRSRVALAEWAPRTDGAGVTFTIEADRFLQRMVRFLVGAMVDVALGRRPPSDLSRLLSATDNQAASPPAPPQGLYLVAVRYPADLYAGAES*