ggKbase home page

13_1_40cm_4_scaffold_1906_20

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: comp(17142..18038)

Top 3 Functional Annotations

Value Algorithm Source
pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 296.0
  • Bit_score: 505
  • Evalue 5.10e-140
pyridoxal phosphate synthase yaaD subunit (EC:4.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 298.0
  • Bit_score: 419
  • Evalue 7.40e-115
Pyridoxal biosynthesis lyase PdxS id=2591425 bin=GWC2_Methylomirabilis_70_16 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 297.0
  • Bit_score: 485
  • Evalue 3.90e-134

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGACGGAGCTGAACGGGTTGCGCATCGCGGATCGCAAGCACATCGGCCTCGCCGAGATGCTCAAGGGCGGGGTCATCATGGACGTGACGAATGCCGAGCAGGCCAAGATCGCCGAGGAGGCGGGGGCGGCGGCGGTGATGGCGCTCGAGCGCGTGCCCGCCGATATTCGAAAAGAGGGCGGTGTGGCCCGCATGGCGTCCGTGAAGAAGATCAAGGAGATTCAGGCTACCGTCACCATCCCGGTCATGGCCAAGTGCCGGATCGGTCACTTCGTCGAGGCCCAAATCCTGGAATCGCTCGCGGTCGATTTCATCGACGAGTCCGAGGTCCTCACGCCGGCCGACGAGCACTTCCACGTGGACAAGTTCGCGTTCCGGGTGCCCTTCGTCTGCGGGGCGCGCGACCTGGGGGAGGCGCTGCGCCGCATCGGCGAGGGCGCGGCCATGATCCGCACGAAGGGCGAGGCCGGTTCCGGCAACATCGTGGAGGCGGTGCGCCACATGCGCGCGCTGACCAGCGGCATCCGGCGGCTGACGACACTCGCGCCCGAGGAGCTGATGACGGAGGCTAAGAACCTGGGCGCGCCCTACGAGCTGGTCGGCTCGGTGCGCAAGCACGGACGGCTGCCCGTCCCGAATTTCTCGGCCGGGGGCATCGCCACGCCCGCCGACGCGGCGCTGATGATGCAGCTCGGCGCCGAAGCGGTCTTCGTCGGCTCGGGCATCTTCAAGTCGAGCGACCCCCCCAAGCGGGCCAAGGCCATCGTCCAGGCCACGACGCACTACAAGGATCCGGACGTCCTGGCCCGGGTCAGCGAGGAGCTGGGCGAGGCCATGGTGGGGCTGGAGACGTCGAAGCTGACGAAAGAGGAGTTGCTGCAGACGCGAGGGTGGTAG
PROTEIN sequence
Length: 299
MTELNGLRIADRKHIGLAEMLKGGVIMDVTNAEQAKIAEEAGAAAVMALERVPADIRKEGGVARMASVKKIKEIQATVTIPVMAKCRIGHFVEAQILESLAVDFIDESEVLTPADEHFHVDKFAFRVPFVCGARDLGEALRRIGEGAAMIRTKGEAGSGNIVEAVRHMRALTSGIRRLTTLAPEELMTEAKNLGAPYELVGSVRKHGRLPVPNFSAGGIATPADAALMMQLGAEAVFVGSGIFKSSDPPKRAKAIVQATTHYKDPDVLARVSEELGEAMVGLETSKLTKEELLQTRGW*