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13_1_40cm_4_scaffold_2529_2

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: 528..1139

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 199.0
  • Bit_score: 310
  • Evalue 2.10e-81
ECF subfamily RNA polymerase sigma factor id=4197918 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 195.0
  • Bit_score: 283
  • Evalue 1.50e-73
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 199.0
  • Bit_score: 156
  • Evalue 6.10e-36

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 612
GTGAGCGTGGCAGATCGGCCGCGGATCGATCCCGACGCGGCGCTCGTCGAAGCGCTCCGGCGCGACGACGTCGAGGCGATGGAGCAGCTCGTCGAGCGGTTCGCCGACCGCGTCTACCGGCTGGCCCTGCGCATCACCGGATCGAACGAGGACGCCGAAGAGGTCACCCAGGACGCGCTCTGGACCGCGGGGCGCAAGATCCACACGTTCAAGGGCGAGTCGGCGTTCGGGAGCTGGCTCTACCGGATCGCCGCCAACGCCGCCTACATGAAGCTCCGCACCCGCAAGGCCAAGGCGCGGGAGATCGCGCTGGACGACGTGCTGCCCTCGCTGGACGAGGCGGGCGTGCACTTCGAGCCGATGGACGATTGGTCGCCCAGTGTGGACGAGCAGGCGCTCCAGGGCGAGCTGCGCTCCGTGCTCGAGGCGGCGATCGACGAGCTGCCGCCGGACTACCGCAGCGCCCTGGTCCTCCACGACGTGGAGGGCATGTCGAACCCCGACATCGCGGAGGCGCTGGGCGTCAGCCTGCCCGCGGTGAAGTCCCGCGTGCACCGCTCGCGCCTCTTCCTGCGCAAGCGCCTGTCGGACTATCTCGCCCCGGCGAGCTGA
PROTEIN sequence
Length: 204
VSVADRPRIDPDAALVEALRRDDVEAMEQLVERFADRVYRLALRITGSNEDAEEVTQDALWTAGRKIHTFKGESAFGSWLYRIAANAAYMKLRTRKAKAREIALDDVLPSLDEAGVHFEPMDDWSPSVDEQALQGELRSVLEAAIDELPPDYRSALVLHDVEGMSNPDIAEALGVSLPAVKSRVHRSRLFLRKRLSDYLAPAS*