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13_1_40cm_4_scaffold_720_5

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: 3542..4780

Top 3 Functional Annotations

Value Algorithm Source
Receptor family ligand-binding protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F7F9_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 412.0
  • Bit_score: 253
  • Evalue 4.50e-64
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 415.0
  • Bit_score: 285
  • Evalue 1.50e-73
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 30.3
  • Coverage: 423.0
  • Bit_score: 148
  • Evalue 3.40e-33

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Taxonomy

R_Rokubacteria_68_19 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGATCGGGTCGAGACGGTTCCCCGCCATCCTGCTCGCGCTGGGCATCGGACTCTCTCTGGCACTGCCCGCCGAGGCCCAGCGCCCCGACCGCGTCAAGATCGGTGGCACCGTCGCCGTCACCGGCCGCTTCTCCAGCGACTGGGGCCCCGGCATCATCGAGTTCATGAAGGGCTGGGAGAGGCTCGTCAACGCCGAGGGGGGCGTCTTCGTCCGCGAATACAACGCGAAGCTCCCCATCGAGCTCGTGCTCTACGACGATGAGTCGAGCCCCGAGAAGTCGGTGGAGCTCTACGAGAAGCTGGCGGCCGTGGACAAGGTCCAGTTCTTCATCGGGCCCGGGTCGAGCCCGATCACGCTCCGCGCCTCGACAGTGGCCGAGCGCCTCAAGATCCCGATGATCCTCGTGGAGGCCAACAGCCCGATCATCTACGCGCGCGGCTTCCAGTGGATCGCTGGTGTGGACCGCCCCGCCCAGTACTGGTCGATCCCGTACTTCGACCTGCTCAAGGAGCTCAGGGACAAGGGTGTCGCGAACTACCGGACCATCGCCTTTCTCATCGAAGACCACCCGCACACCAAGGACATCGCGGAGGGCTCCGTCGAGCTGGCGAAGAAGGCGGGCCTGGAGGTGGTCGCCACCGAGTCGGTGCCGTTTCAGACGAGCGATTTCTCGGCGGTGATCGCCAAATTCAAGCAGCTCAGCCCCGATATCGTGTCCTCGTCGGGGTGGACCCCCACCAGCGTGCCGTTCGTCAAGCAGGCCAACGAGCTCGGCCTCAAGCCCCGGGAGCTCCACGTCATCCACCTGGTGCCCGAGTTCGCTCAGCAGACCGGTCTCAAGCTCGCCGAGGGCGTGACCGGCGAAACCCACATCGCCCGCAAACATCTCGACCAGCGTTACCTCACGATCCTCAAGCAGCTCAACGTGGGCGATCCCTACGGCTTCAAGTCGCTCGTGCTGCCGATCCGGTACCTGGCGCTGGAGACCATGCGGCGGGGCATCGAAGCCGCCGGGACGCTCGACCGCGAGAAGTTCATGGCGGCGCTTCGCACCCTTCAGTTCGACACGCTGCACGGCCCGCACCGCTTCAACTACAACGTGAAGCTCGGCAACCGCGTGCTCAACGGCATGGGCGAGAAGTACCTCTACGCGGGACAGTTCCAGAACGGCAAGATCGTCATCATCGCGCCGGCCGCGGCGGCGGACGGCCCCTACCGGCCGGCTCCGCGCCAGTAG
PROTEIN sequence
Length: 413
MIGSRRFPAILLALGIGLSLALPAEAQRPDRVKIGGTVAVTGRFSSDWGPGIIEFMKGWERLVNAEGGVFVREYNAKLPIELVLYDDESSPEKSVELYEKLAAVDKVQFFIGPGSSPITLRASTVAERLKIPMILVEANSPIIYARGFQWIAGVDRPAQYWSIPYFDLLKELRDKGVANYRTIAFLIEDHPHTKDIAEGSVELAKKAGLEVVATESVPFQTSDFSAVIAKFKQLSPDIVSSSGWTPTSVPFVKQANELGLKPRELHVIHLVPEFAQQTGLKLAEGVTGETHIARKHLDQRYLTILKQLNVGDPYGFKSLVLPIRYLALETMRRGIEAAGTLDREKFMAALRTLQFDTLHGPHRFNYNVKLGNRVLNGMGEKYLYAGQFQNGKIVIIAPAAAADGPYRPAPRQ*