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13_1_20cm_full_scaffold_129_7

Organism: 13_1_20CM_Gemmatimonadetes_69_28

partial RP 8 / 55 BSCG 9 / 51 ASCG 4 / 38
Location: 4827..5471

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 195.0
  • Bit_score: 288
  • Evalue 4.90e-75
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 211.0
  • Bit_score: 357
  • Evalue 1.60e-95
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 212.0
  • Bit_score: 309
  • Evalue 1.00e-81

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 645
ATGCGAGTTGCCCTCAAACAGAAGACCCCAGCCCCGACCACCCCGCGCGCGCGGGAGCGCGAGGCGCTCCACGAGCTGGACGACGGCCGGCTCGTGCTCGAGCACCTGGCGGGCGACGCCCAGGCGTTCGGTGCGCTCGTCGACCGCTACCAGACCCGACTGCTCAACTTCATCAACCGCACGATCGGGGACCGTGAGCGGGCCGAGGACCTGGTGCAGGAGGTATTCATCCGGGTCTTCCGCCATCTGCACCGTTTCGACCAGACGAAGAAGTTCTCCACCTGGATCTATACGATCGCCTCGAACCTGGCCAAGAACGAGCTCCGCAACCGCAGTCGCAACCCGCTCGTCCTGTTCCAGACGATCAAAAAACACTGGGAGGCCGACCACCGGCCGCTCCAGTTCGAGGACGCGACCGCCCGGCCGGACGATCTGTACCGCAAGCGCTACCTCAAGGAAGCGGTGGATCAGTGCGTCGGGCAGCTCCCCACCCACCACCGCGCCGTCTTCGTGCTGCGTGAGCTCGAAGGGAAGAGCTACGCCGAGATCGCCGATATCACCGGTTGCAACCTGGGCACGGTAAAGAGCCGCCTCAACCGGGCACGCAACAGCTTCGCGCAGCTAATCGAGCCCCTGCTCGAATAG
PROTEIN sequence
Length: 215
MRVALKQKTPAPTTPRAREREALHELDDGRLVLEHLAGDAQAFGALVDRYQTRLLNFINRTIGDRERAEDLVQEVFIRVFRHLHRFDQTKKFSTWIYTIASNLAKNELRNRSRNPLVLFQTIKKHWEADHRPLQFEDATARPDDLYRKRYLKEAVDQCVGQLPTHHRAVFVLRELEGKSYAEIADITGCNLGTVKSRLNRARNSFAQLIEPLLE*