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13_1_20cm_full_scaffold_260_1

Organism: 13_1_20CM_Gemmatimonadetes_69_28

partial RP 8 / 55 BSCG 9 / 51 ASCG 4 / 38
Location: 1..627

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 205.0
  • Bit_score: 309
  • Evalue 4.90e-81
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 209.0
  • Bit_score: 254
  • Evalue 1.00e-64
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 212.0
  • Bit_score: 263
  • Evalue 6.20e-68

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 627
GGTGGCGAGCTGTACGTCAACAAGGGCCGCGGCTACGTGGAGGCCGAGCAGCATCCGCTCGACCGCACCATGCCCGTCGACGTCGTCCGCATCGACTCGATCTACAACCCGGTGCGGCGCGCCAACTTCACGGTCGCGGAGACGCGCGTGGGGCAACGTACCGACTACGATCGGCTCACGCTCACCGTCGAGACGAACGGAACGATCACGCCGGAAGATGCGGTGGCGTACGCCGCCGCCCTGGCGCAGGAGCACTTCCGTTTCTTCGTCGACTTCGGGAAGGTGCCGATGGTGGCGGCGCAGCCCGCCGGCAACGGCGGCGCCGCAACGGGCCGGCTGCGCGAAGTGCTGGGCCGCAGCATCGACGACGTCGGCCTCTCGGTGCGGTCGGTCAACTCCCTCAAGAACTCGAACATCCGCACGCTCGGGGACCTCGTGCAGTACCGCGAGGAGGACCTGCTCAAGGTGAAGAACGTCGGCGAAAAGGCGCTCGGGGAGATCGCCGAACTGTTGCGGCGCGAAGCCCTGAACTTCGGGATGCGGGTCGAGGACGTGGAAGGGGAGCTGCGCGTTCTCGACCCTGGTGCGCCGCCGCAGGCGCAGGTCACCGAGGGCGAGGGCGAGTAA
PROTEIN sequence
Length: 209
GGELYVNKGRGYVEAEQHPLDRTMPVDVVRIDSIYNPVRRANFTVAETRVGQRTDYDRLTLTVETNGTITPEDAVAYAAALAQEHFRFFVDFGKVPMVAAQPAGNGGAATGRLREVLGRSIDDVGLSVRSVNSLKNSNIRTLGDLVQYREEDLLKVKNVGEKALGEIAELLRREALNFGMRVEDVEGELRVLDPGAPPQAQVTEGEGE*