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13_1_20cm_full_scaffold_702_4

Organism: 13_1_20CM_Gemmatimonadetes_69_28

partial RP 8 / 55 BSCG 9 / 51 ASCG 4 / 38
Location: 4274..7552

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=861299 species="Bacteria; Ge similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 999.99
  • Bit_score: 1262
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 999.99
  • Bit_score: 1206
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 999.99
  • Bit_score: 1262
  • Evalue 0.0

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 3279
ATGCCGCTCGACTTTCTCATCGATCGCTTCGATGAGCTGCCGGCGACCCGAGCCCTCGCCGAGCGCCTCCCGAGTCCCGGGTCCCGAATCGCGTTGTCCGGGCTGCCCGGTTCCAGTCCCGCGGTCCTCGTCGCTGCCCTAGCTCGCCGGTTCCCGCAACGCGTATTCGTCGTGGTCACGCCGACTCCGACCGACGCGGAGCGCTGGCTCGCGGACGCCCGTGCCCTCGCCGGCGATGCGGCGGCGCTGTATCCGCAACGCGAGGCCCTCGGAGCCGAAGAACCGCACGTCGAAATCGCGGGCGAGCGCATCGAAACCCTCGAGGCGCTGTTATCGGGCAGGGTCCGCATGCTCGTCACGACGGCGCGCGCTGCGGCGGAGCGGACGGCGGTGCCGGCGGCGCTCGAGTCGATGCGGCTCGTGTTGCAGGTAGGCCCCGGGAGCCTCACGGAGGTCGTGCGGCGGCTCGGAGCGATGGCGTACGATCGCGTCCCCACGGTGACCGAGGTCGCCCAATTCAGCGTGCGCGGCGGCATCCTCGATGTGTACGGGTTCGGGATGGCGGCGCCGACTCGGGTCGAGTGGTCCGGCGATGACATCGTGTCGTTGCGCCCGTTCGATCTGGACTCCCAACGCTCGGGGGAGCCGATCGAGCGTGTCACGGTCCTGCCGGTGAGCACCGAGGGGATCACGACCAGTGTAGGGGCGCATGCTGCGTCCCAGCAGCGGCACTCCTTGCTCACTCTGCTCCCTACCGATGCGCTGCTCGTGCTGGCACAGGAGTCCGCGCTGGAGCAGGAAGTCGATCGGGCGTGGGCGGAGGCGGAGCATCACCTTGAGATCGCCCGGCGGCTGGGCGAAGCGCCGCCCGCGCGGGCGGAGATCTTCATCGCGCCCGAGCAGTGGCGCCGCGATCTGGGGGCATTTGCCCGTGTGGCTCTCGATGCACCGGGCGAGGCGACGCGCTTTCCGCTCGCCCCGCCGGAGCCCGTGGACCGCGACATCAAACGGCTGCGGCGGCTCGTCGTCGCCGGTCCGCCGACGGTGATCTTGTGCGACAACGCGGGCCAGCTCGAGCGGTTGGAGGAGCTGCTCGGCGCCGAGGTCGCGACGCTGGCCGTGGGAGCGCTCGACGGCGGTTTCGTGCTGCCGTCGCTCCGGGTGCTGACCGACCACGAGATCTTCCGCCGCGCACGCCGTCTGCGGCGGCCCCGGCGCTACCGCGAAGCGTCCCCCACCGCCGCGGCCCGCGCGCTGCAGCAGGGCGACTATGTGGTGCACCTCGAGCACGGGATCGGGCTGTACCGCGGGATCCAGACGATCGCGGTGGGCTCGGAGGGCGGGACGCTCGAAGTGGCGGTGGTCGAATACGAAGGGGGCGACCGGCTCAACGTCCCGCTGTACCGGCTGGATCAACTGGAGCCGTATCGCGCGGCGGGGAACGGAGATGCCCCGCCCCCCAAGCTGCACCGCCTGGGCGCCACGACGTGGCAGCGTCAGCGGGACAAGACCCGCGCCGCCATTCGCCAGATGGCGGCCGAGCTGCTCGACCTGTACGCCCGCCGCCAGCTCGCGACCGGCTTCGCGTTCCCGCCCGACACCCCGTGGCAGCGCGAGCTCGAATCGGCTTTCCTGTACGAGGATACCCCCGACCAGCGTCGCGCCTCCGAGGAGGTGAAGCGTGACATGGAGCGCGCCCGACCGATGGACCGGTTGCTGGTCGGCGACGTAGGATACGGCAAGACCGAGGTCGCGCTGCGGGCGGCCTTCAAGGCGGTGCAGGCGGGGAAGCAGGTGGCAGTGCTCGCGCCCACCACGATCCTCGCCGAGCAGCACGGACGCACCTTCCGCGAGCGGCTGGCCGACTATCCGGTGCGTATCGAGGTGCTCTCCCGTTTCCGTGGCCCGAGCGACACGCGGCGGGTCGTCCAGGGCCTGGAGCGCGGGGAGGTGGATTTAGTGATCGGCACGCACCGGCTGTTGTCGCGCGACGTTCGGTTCCACGACCTGGGGCTGCTGATCGTGGACGAGGAGCATCGGTTCGGCGTGCGGCACAAGGAGCGTCTGAAGGCGCTGAAGCTCGCGGTGGATGTGCTCACGCTCACGGCGACGCCGATCCCCCGCACCCTGCACCTCTCGCTTGCGGGATTACGCGACCTGACGCTGCTCGAGACGCCGCCCAAAGACCGCTCGCCGGTCCTAACGTTCATCGAGCCATGGGACGACGCGCTGATCGAGGAGGCGCTGGCGCGGGAGCTCGACCGGGCGGGGCAGGTGTATTTCGTGCACAACCGCATCGAGACGATCGACACCATCGCTGAGCGGGTGCGCGCGCTCGCGCCGCCGCGCGCCCGCATCGCGGTGGCGCATGGCCGGCTCAAAGAAGCCGAGCTGGACGACGTCATGACGCGCTTCGTCCGCGCCGAAGTGGACATTCTCGTGTCCACGATGATCGTCGAGTCGGGCCTCGACGTCCCCAACGCGAACACCATGATCGTGAACCGCGCCGATCAGTTCGGCCTGGCGCAGCTGTACCAGTTGCGGGGTAGAGTGGGACGTAGCCATCGCCGCGCCTACTGCTATCTGCTCGCGCCCGATCTCGTCGATGGGGAAGCGGAGGAACGGCTGCGGGTGTTGGAGCATCACACGGAGCTGGGCGCCGGCTATCGCATCGCGCTGCGCGATCTGGAGCTGCGCGGCGCCGGGAACCTGCTCGGCGGCGAACAATCGGGTCATGCGCAGGCCGTCGGGTTCGACGTCTATCTGCGATGGCTGCAGGAGACCGTCGACGCGCTGAAGGGGGATGGCGCAGCGGGCACGGGGAAAGGCGCGCCGCCGGAAGTGGTGCTCGATCGTCCGGCGCATCTCCCGGACGACTACGTCGCCGACGCGGCGGCGAAGCTCGATCTGTACCGGCGGCTGGCGCGAGCCGAGCGGCCGTGCGAGATTCAAACCGTGCGCGAGGAACTGCGCGATCGCTTCGGCCCTCTCCCGGACCCGGCGCAGCGGCTGCTCCTCGTGTCCGAGCTCCGCGCGCTCGGCGCCCAGGTGGGACTGGAGACGGTTCTCGTCAAGGGTGACGAAGCGCGGCTGACGTTTCGGCGGGACGCGCACCCGCGCCTCGCCGGGCTGACGGCGGCGCTCGACGCCGTGCAGTTCGAGGCGGAGGTGCGGCGTCCCGTACCGCTCTCGCTGCGGCTGCGCCGGCTCGGCGGGGAGGCCATCGGTCCCGGTCTCGTGCGGGCCCTCACCGCGGTTCTGCAGCGCCCTCACGGTTAA
PROTEIN sequence
Length: 1093
MPLDFLIDRFDELPATRALAERLPSPGSRIALSGLPGSSPAVLVAALARRFPQRVFVVVTPTPTDAERWLADARALAGDAAALYPQREALGAEEPHVEIAGERIETLEALLSGRVRMLVTTARAAAERTAVPAALESMRLVLQVGPGSLTEVVRRLGAMAYDRVPTVTEVAQFSVRGGILDVYGFGMAAPTRVEWSGDDIVSLRPFDLDSQRSGEPIERVTVLPVSTEGITTSVGAHAASQQRHSLLTLLPTDALLVLAQESALEQEVDRAWAEAEHHLEIARRLGEAPPARAEIFIAPEQWRRDLGAFARVALDAPGEATRFPLAPPEPVDRDIKRLRRLVVAGPPTVILCDNAGQLERLEELLGAEVATLAVGALDGGFVLPSLRVLTDHEIFRRARRLRRPRRYREASPTAAARALQQGDYVVHLEHGIGLYRGIQTIAVGSEGGTLEVAVVEYEGGDRLNVPLYRLDQLEPYRAAGNGDAPPPKLHRLGATTWQRQRDKTRAAIRQMAAELLDLYARRQLATGFAFPPDTPWQRELESAFLYEDTPDQRRASEEVKRDMERARPMDRLLVGDVGYGKTEVALRAAFKAVQAGKQVAVLAPTTILAEQHGRTFRERLADYPVRIEVLSRFRGPSDTRRVVQGLERGEVDLVIGTHRLLSRDVRFHDLGLLIVDEEHRFGVRHKERLKALKLAVDVLTLTATPIPRTLHLSLAGLRDLTLLETPPKDRSPVLTFIEPWDDALIEEALARELDRAGQVYFVHNRIETIDTIAERVRALAPPRARIAVAHGRLKEAELDDVMTRFVRAEVDILVSTMIVESGLDVPNANTMIVNRADQFGLAQLYQLRGRVGRSHRRAYCYLLAPDLVDGEAEERLRVLEHHTELGAGYRIALRDLELRGAGNLLGGEQSGHAQAVGFDVYLRWLQETVDALKGDGAAGTGKGAPPEVVLDRPAHLPDDYVADAAAKLDLYRRLARAERPCEIQTVREELRDRFGPLPDPAQRLLLVSELRALGAQVGLETVLVKGDEARLTFRRDAHPRLAGLTAALDAVQFEAEVRRPVPLSLRLRRLGGEAIGPGLVRALTAVLQRPHG*