ggKbase home page

13_1_20cm_full_scaffold_3355_3

Organism: 13_1_20CM_Chloroflexi_66_33

partial RP 21 / 55 BSCG 12 / 51 ASCG 2 / 38
Location: comp(1667..2578)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1385510 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 293.0
  • Bit_score: 274
  • Evalue 1.50e-70
rluD3; pseudouridine synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 278.0
  • Bit_score: 262
  • Evalue 2.00e-67
RNA pseudouridine synthase n=1 Tax=Caldibacillus debilis RepID=UPI000364E96E similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 299.0
  • Bit_score: 270
  • Evalue 2.60e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pontibacillus halophilus → Pontibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 912
GTGAGCGAGGTTGAACACCATACCGTCCCGGTCGACGCCCCGCGACTCGACCAGTACCTGGCCGGCCTGCTCACCGGACAGAGCCGAAACCGGGTCCAACGGCTGATCGCCGACGGGCATGTCCGGGTCAACGATGGTGCGGCCCGGGCCGGGCTGCGCCTCCGCAAGGGAGATCGGCTTAGCTGGGAGCTGCCGCCGACAACGCCCAGCCGGCTCCAGGCCGAAGCCATGGACCTCCGCGTGCTTTACGAGGACGACGACCTGGTCGTCATCGACAAACCGGCCGGGCTGGTGGTGCACCCGGGACCCGGACATGCCACCGGCACGCTGGTTCATGGGTTGCTGGCCCGCGGTGCCGGATGGTCGACCATCGGTGGCGCCGAGCGGCCCGGCATCGTCCACCGGCTCGACCGTGACACATCGGGCCTGATCGTGGTCGCGCGCAATGATGCGACGCATCGCGCGCTCACCCGCCAGCTGCAGCAACGGCTGATGACCCGTCGCTACCGGGCGATCGCGGTGGGTGAGGTGGCCGATCCAGCGGCGCGGATCGAGGCGCCCATCGGCCGCGACGTCAAGCACCGGCAACGGATGGTGGTGGTGGCCGGGGGTCGGGAAGCGATCACGGAATTCGTCCGGCTGGGCGTTGCCGGCGGCCACTCACTGCTCCAGGTCTCGCTCACCACCGGACGCACGCATCAGATCCGCGTCCATCTCGCGTTCATCAAGCACCCGGTGCTCGGCGACCCGGTCTACGGGCACCGTTCGCCGCTGATCGGAAGGCCCGCGCTGCACGCCGAGACGCTCACCCTCCGGCATCCGCGCACCGGGAAATCGATGACCTGGCAGGCCGCGCCACCGGAGGATTTCGAACTGGCGTGGAACTCGCTGAGTGTCCGTACAATGCGGTGA
PROTEIN sequence
Length: 304
VSEVEHHTVPVDAPRLDQYLAGLLTGQSRNRVQRLIADGHVRVNDGAARAGLRLRKGDRLSWELPPTTPSRLQAEAMDLRVLYEDDDLVVIDKPAGLVVHPGPGHATGTLVHGLLARGAGWSTIGGAERPGIVHRLDRDTSGLIVVARNDATHRALTRQLQQRLMTRRYRAIAVGEVADPAARIEAPIGRDVKHRQRMVVVAGGREAITEFVRLGVAGGHSLLQVSLTTGRTHQIRVHLAFIKHPVLGDPVYGHRSPLIGRPALHAETLTLRHPRTGKSMTWQAAPPEDFELAWNSLSVRTMR*