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13_1_20cm_full_scaffold_1316_1

Organism: 13_1_20CM_Rokubacteria_70_15

partial RP 4 / 55 BSCG 2 / 51 ASCG 0 / 38
Location: 1..690

Top 3 Functional Annotations

Value Algorithm Source
Type III effector Hrp-dependent outers n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHU6_THET1 similarity UNIREF
DB: UNIREF100
  • Identity: 34.0
  • Coverage: 241.0
  • Bit_score: 102
  • Evalue 5.40e-19
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 230.0
  • Bit_score: 269
  • Evalue 4.70e-69
Hrp-dependent type III effector protein similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 241.0
  • Bit_score: 102
  • Evalue 1.50e-19

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 690
CGCGTCGAGGGAACCGCGGTGGCCCACGTCGTGGACTGGATCCGCTCGGAGACCGACCGGCCGCTGGCGTGGATCCCGCTGGCCGAGGTGCGCGCGGGCGTCGCCGTGCTCGCGGCGCGCCTGGCGCGGCTCACGGGGACGATCGCCGTCGCCGACGCCGAGACAGACGCCGATCTCGACACGATCGTCGGCGCCGCGCTGGCACTCGACCGCGCGCCGCTTCTCGCCGGCTCCGCCGGCCTGGCCCGGCCGCTGGCCGAGCGTCTTGGCCTCAGCGCGGAGCGCGCGTTGCTGCCCGGCGGGCGCTGGCTGGTGGTCGCGGGGAGCCGCCACCCCGCGACGCGGCGCCAGCTCACCGAAGCACGGCGCGCCGGCTTCCGCGTCCTCGCGACGGCCGACGCCGAGGACGCGGACGAGAGCGATGCCGCCGTGACGCTCGCCCGGGAGGCAGCGCATGTGCTCGCGACGGAGTCGTTCGATCTGATCGCCCTGGCAGGGGGCGACACCGCCGTCGCGTTCTATCGGACGCTCGGCGCCGTGCGCATCGATCTCGTCGGCGCCCCGCGCCCGGGCCTGGCCTTCGGACACGTGCGAGCGCCGGGCCATCCGGCGCTGCCCGTGCTGACCAAGGCCGGCGGCTTCGGACCGCCGGACCTGTTCGTCTCGCTCTGGAAGGAGGCGACGACGTGA
PROTEIN sequence
Length: 230
RVEGTAVAHVVDWIRSETDRPLAWIPLAEVRAGVAVLAARLARLTGTIAVADAETDADLDTIVGAALALDRAPLLAGSAGLARPLAERLGLSAERALLPGGRWLVVAGSRHPATRRQLTEARRAGFRVLATADAEDADESDAAVTLAREAAHVLATESFDLIALAGGDTAVAFYRTLGAVRIDLVGAPRPGLAFGHVRAPGHPALPVLTKAGGFGPPDLFVSLWKEATT*