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13_1_20cm_3_scaffold_12580_10

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 8392..8736

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding protein RbpA n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VXL3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 113.0
  • Bit_score: 168
  • Evalue 5.30e-39
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friu UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 113.0
  • Bit_score: 166
  • Evalue 2.10e-38
electron transport protein similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 113.0
  • Bit_score: 166
  • Evalue 4.30e-39

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Taxonomy

Actinoplanes friuliensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 345
GTGGCCAGTGGCAACGCCATCCGTGGTGTCCGGGTCGGCTCCGGCCCGATCCGCCCCGACGAACGCTGTGACCCCGTCCCCGTACGTGCCGTCGCCTACTGGTGCGCCAACGGCCACCGGATCGAGCCGCTGTTCGCGGCCGATGCCACCGCGCCGGCCACCTGGGAGTGCCCGCGCTGCGGGCTGCCGGCGGGGCGCGACGAGCAGCATCCGCCGGGCAAGCCGCGCAGCGAGCCGTACAAGAGCCACCTGGCCTACGTGAAGGAGCGCCGGTCCGAGGCGGAGGGCGCGGCGATCCTCGCCGAGGCGCTACGCCAGCTCCGCCAGCGCCGCGGCGAGGAGTAG
PROTEIN sequence
Length: 115
VASGNAIRGVRVGSGPIRPDERCDPVPVRAVAYWCANGHRIEPLFAADATAPATWECPRCGLPAGRDEQHPPGKPRSEPYKSHLAYVKERRSEAEGAAILAEALRQLRQRRGEE*